Query= MSMg01no119_d24.b1 MSMg01no119_d24.b1 CHROMAT_FILE:
MSMg01no119_d24.b1 PHD_FILE: MSMg01no119_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:20 2005
(538 letters)
>mm_chr7_120030941_120031878
Length = 938
Score = 319 bits (165), Expect = 3e-91
Identities = 171/173 (98%)
Strand = Plus / Plus
Query: 1 agcctttggttgtggggaagtcaaccaagagtccgaagttcaaggccatccttgacttaa 60
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 201 agcctttggttgtggggaagtcaaccaagagtccaaagttcaaggtcatccttgacttaa 260
Query: 61 tcagggtaagtagtgggtttctgtgagcctcagactcattacagatgtctacttcgttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagggtaagtagtgggtttctgtgagcctcagactcattacagatgtctacttcgttgc 320
Query: 121 ttcccttctttcttaggttaccttgctcttggggagttagccgacttatgttt 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcccttctttcttaggttaccttgctcttggggagttagccgacttatgttt 373
Score = 315 bits (163), Expect = 4e-90
Identities = 172/175 (98%)
Strand = Plus / Plus
Query: 364 ccgacttatgtttctttctagaatagttctaacgcaatcagaaccttctagaatattctg 423
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 361 ccgacttatgtttctttctagaatagttctaacgccatcagaaccttctagaatattcta 420
Query: 424 aagagcatccgtgctataactggtgactgcagaattatttttcatgtgcaaagatagttt 483
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagagcatccgtgttataactggtgactgcagaattatttttcatgtgcaaagatagttt 480
Query: 484 ttgtaaagcagttctgatgtcccctgagattaggtgacttgccacccgctgggca 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgtaaagcagttctgatgtcccctgagattaggtgacttgccacccgctgggca 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_d24.g1 MSMg01no119_d24.g1 CHROMAT_FILE:
MSMg01no119_d24.g1 PHD_FILE: MSMg01no119_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:20 2005
(431 letters)
>mm_chr7_120165746_120166576
Length = 831
Score = 812 bits (420), Expect = 0.0
Identities = 430/436 (98%), Gaps = 5/436 (1%)
Strand = Plus / Minus
Query: 1 ctgacctagattctggctcttcctccaggctgacgtctccttcccatcctcagcccacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ctgacctagattctggctcttcctccaggctgacgtctccttcccatcctcagcccacag 407
Query: 61 atctatttgcataccccttgacctgggtgcttggttatacttgccctgcccactggccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atctatttgcataccccttgacctgggtgcttggttatacttgccctgcccactggccag 347
Query: 121 gatgagtttggaagttgttttcctatctctatatttcccctgtttcctttgggctgagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gatgagtttggaagttgttttcctatctctatatttcccctgtttcctttgggctgagtg 287
Query: 181 aatccctcgttaacttagaacagtttctctagctccactccacctagtacagatgcatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aatccctcgttaacttagaacagtttctctagctccactccacctagtacagatgcatgg 227
Query: 241 acttttaagaatctaactcctaggtaggcatggtggcacacactgtcatcccagcgctca 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 226 acttttaagaatctaactcctaggtaggcatggtggcacacgctgtcatcccagcgctca 167
Query: 301 ggaggcaggggcaggggaatctctgagttcaaggccagcctagtgcacagtatgagttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ggaggcaggggcaggggaatctctgagttcaaggccagcctagtgcacagtatgagttcc 107
Query: 361 aggacagccaggactgcatggaaagaccaaaccaaaccaaaccaaa-----taaaaagaa 415
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106 aggacagccaggactgcatggaaagaccaaaccaaaccaaaccaaaccaaataaaaagaa 47
Query: 416 tctagctcttgctagt 431
||||||||||||||||
Sbjct: 46 tctagctcttgctagt 31
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
