Query= MSMg01no119_k16.b1 MSMg01no119_k16.b1 CHROMAT_FILE:
MSMg01no119_k16.b1 PHD_FILE: MSMg01no119_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:52 2005
(614 letters)
>mm_chr7_101471342_101472356
Length = 1015
Score = 1067 bits (552), Expect = 0.0
Identities = 597/612 (97%), Gaps = 1/612 (0%)
Strand = Plus / Plus
Query: 4 gaattctataatattgca-tccatttctgtgctttgttgtagtgttttgtctcaatcaat 62
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctataataaagcaatccatttctgtgctttgttgtagtgttttgtctcaatcaat 263
Query: 63 atattggtattctaatgaatgaatataaaagtaagtgctttatgaatattcatcattttc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atattggtattctaatgaatgaatataaaagtaagtgctttatgaatattcatcattttc 323
Query: 123 aacattgagattttttttaacttctctatcaatgttcacaacaattcctagcaatttgtc 182
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aacattgagatttcttttaacttctctatcaatgttcacaacaattcctagcaatttgtc 383
Query: 183 tgtgacaaaaatctaatagttaaattaaaggaaaaacacaaaacaaaacaaagtaaatgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgacaaaaatctaatagttaaattaaaggaaaaacacaaaacaaaacaaagtaaatgg 443
Query: 243 cttgatgtgctaagctccagatttgtcagtgaaagttttttattggcttactgcacagca 302
|||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 444 cttgatgtgccaagctccagatttgtcagtgaaaggtttttagtggcttactgcacagca 503
Query: 303 tcataatttataagttatagcgtgcatttctcagtatgaagaaccttatggcatgtgcag 362
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcataatttataagttatagcatgcatttctcagtatgaagaaccttatggcatgtgcag 563
Query: 363 tttggcctcttgggtaagaacatgaagtcacttaaaactgcatctgcttgcaccccatcc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttggcctcttgggtaagaacatgaagtcacttaaaactgcatctgcttgcaccccatcc 623
Query: 423 ttcttacttgttgcgattgcctcacgagggtaacttttgagcatctttttgatcacttag 482
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcttacttgttgccattgcctcacgagggtaacttttgagcatctttttgatcacttag 683
Query: 483 attcctataccttgtagtaatggagagtattagttttgagatggctgtcaaagtggtttt 542
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 684 attcctataccttgtagtaatagagagtattagtttggagatggctgtcaaagtggtttt 743
Query: 543 gtagttaaacctgatcaacagctatttgtgctctgtcaacatatgagtgaaagtgttaat 602
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 744 gtagttaaacctgatcaacagctatttgtgttctatcaacatatgagtgaaagtgttaac 803
Query: 603 gatgttctctta 614
|||||||||||
Sbjct: 804 aatgttctctta 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space: 607020
Effective search space used: 607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_k16.g1 MSMg01no119_k16.g1 CHROMAT_FILE:
MSMg01no119_k16.g1 PHD_FILE: MSMg01no119_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:53 2005
(479 letters)
>mm_chr7_101551681_101552559
Length = 879
Score = 636 bits (329), Expect = 0.0
Identities = 362/377 (96%), Gaps = 11/377 (2%)
Strand = Plus / Minus
Query: 1 cagtggaatatggggtatgcatcctgaggtagagttccctgatgagcttcatctgctgat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 446 cagtggaatatggggtatgcatcctgaggtagagttctctgatgagcttcatctgctgat 387
Query: 61 acattctggaaaatgtgagcaacattctctaaatcagtggctagagaagaatctcagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acattctggaaaatgtgagcaacattctctaaatcagtggctagagaagaatctcagagc 327
Query: 121 tggaaatatgtctatgtttgatctgtagggttagacctaattaataaacaagacatagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tggaaatatgtctatgtttgatctgtagggttagacctaattaataaacaagacatagag 267
Query: 181 ccagtttcaaaggaagggtaaccatgggttgcgtatttctgaattttttttaattgtatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ccagtttcaaaggaagggtaaccatgggttgcgtatttctgaattttttttaattgtatc 207
Query: 241 gctgttctta---tttctcccctttctttctttctttctttctttctttctttctttctt 297
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gctgt--ttagggtttctcccctttctttctttctttctttctttctttctttcttt--- 152
Query: 298 cctttctttctttctttctttctttctttctttctttctttc-ttccttccttccttcct 356
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 151 -ctttctttctttctttctttctttctttctttctttctttccttccttccttccttctt 93
Query: 357 tccttccttccttcctt 373
|| ||| ||| ||||||
Sbjct: 92 tctttctttc-ttcctt 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 141
Number of extensions: 44
Number of successful extensions: 44
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
