Query= MSMg01no122_i12.b1 MSMg01no122_i12.b1 CHROMAT_FILE:
MSMg01no122_i12.b1 PHD_FILE: MSMg01no122_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:05 2005
(702 letters)
>mm_chr7_59845861_59846964
Length = 1104
Score = 1218 bits (630), Expect = 0.0
Identities = 685/704 (97%), Gaps = 2/704 (0%)
Strand = Plus / Minus
Query: 1 aagaaggaagagagtgcatgtgtattgatatgtacttcatgtttagtattttgtcttctg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 aagaaagaagagagtgcatgtgtattgatatgtacttcatgtttagtattttgtcttctg 845
Query: 61 tagggatcagacctagtacatccttattcaatgaatataaaattggatgaaacagtagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tagggatcagacctagtacatccttattcaatgaatataaaattggatgaaacagtagag 785
Query: 121 tctgactgataaagaaaatagatgcaattgctcatgtcttaaatgcagaaatggtagcac 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tgtgactgataaagaaaatagatgcaattgctcatgtcttaaatgcagaaatggtagcac 725
Query: 181 cacttcatagaatgtttatcacatttgaatgattgaaaatgcttcagtaatgcttggtgg 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cacttcatagagtgtttatcacatttgaatgattgaaaatgcttcagtaatgcttggtgg 665
Query: 241 agagcgactttcatgtaagtattagttgtttttcttagaggcaagtttagtggtaataag 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 664 agagcgactttcatgtaagtattagctgtttttcttagaggcaagtttagtggtaataag 605
Query: 301 aaacttatttcagcacctagactcatagacaagaatcagagagtggcacttgggaatgct 360
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 604 aaacttatttcagcacatagactcatagacaagaatcagagagtagcacttgggaatgct 545
Query: 361 aactagaatcactgacctaagaaaacagagaaattaacaaaattaggtctcccagctcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aactagaatcactgacctaagaaaacagagaaattaacaaaattaggtctcccagctcca 485
Query: 421 aatttccctcgtcaagctgaacaaatgtgaattgtgagactactaatgaaggtattatga 480
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 484 aatttccctcgtcaaggtgaacaaatgtgaattgtgagacgactaatgaaggtattatga 425
Query: 481 gatagcatggaacatgtccaccatcaggaatgagtgaaatttaaacagcaaaattgaaat 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 424 gatagcatggaacatgtccaccatcaggaatgagtgaaacttaaacagcaaaattgaaat 365
Query: 541 aactatagtcagggtcatgaatcatcttgaaactcaataatcaacaatttcaatatctcc 600
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 364 aactatagtcagggtcatggatcatcttgaaactcaataatcaactatttcaatatcacc 305
Query: 601 tgcaaagtggtgaatgctggataagcattgacactttgatttttatatatttttaaagac 660
|||||||||||||||||||| | || ||||||||||||||||||||||||||||||||||
Sbjct: 304 tgcaaagtggtgaatgctgggttagtattgacactttgatttttatatatttttaaagac 245
Query: 661 ctattttatgtt--taggtgtgtgaatatttataaagtacatga 702
|||||||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 244 ctattttatgttagtaggtgtctgaatatttataatgtacatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1104
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1094
Effective search space: 757048
Effective search space used: 757048
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no122_i12.g1 MSMg01no122_i12.g1 CHROMAT_FILE:
MSMg01no122_i12.g1 PHD_FILE: MSMg01no122_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:05 2005
(778 letters)
>mm_chr7_59675693_59676870
Length = 1178
Score = 1473 bits (762), Expect = 0.0
Identities = 774/778 (99%)
Strand = Plus / Plus
Query: 1 attctcaaagaggaaatatcagaggacagacagcgaagtaacccgggttgtaatgggaca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 attctcaaagaggaaatatcagaggacagacagtgaagtaacccgggttgtaatgggaca 260
Query: 61 tggcatgccccataaggaacaagaagcatttggatgtactgacatgtatggatgtgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcatgccccataaggaacaagaagcatttggatgtactgacatgtatggatgtgaaaa 320
Query: 121 accatggcatctgcagttttacaaaccatagaggtttcatttataaataaaacagtcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accatggcatctgcagttttacaaaccatagaggtttcatttataaataaaacagtcaag 380
Query: 181 ttcataagtagatatgtcagtctttttgtataaattaaaagaagtcttattgtgttacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcataagtagatatgtcagtctttttgtataaattaaaagaagtcttattgtgttacat 440
Query: 241 ttttggaaaagttgaaaattatgaacatgactaagtgaaagctaactttttttaatatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttggaaaagttgaaaattatgaacatgactaagtgaaagctaactttttttaatatgt 500
Query: 301 catgaaagatatctgtgtacatttttctgtgtacattttccttacattctattcaccatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgaaagatatctgtgtacatttttctgtgtacattttccttacattctattcaccatg 560
Query: 361 tactcactgattgccaataccagattagtttacataaacttacataataagtttacataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tactcactgattgccaataccagattagtttacataaacttacataataagtttacataa 620
Query: 421 agattagaaaacatatccagccattcttctattgtactatgctgaaatatatttacatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agattagaaaacatatccagccattcttctattgtactatgctgaaatatatttacatta 680
Query: 481 taaggtatttttaagtctttaaattcccatggatagctccaaagttcataaatgcatctt 540
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 taagatatttttaagtctttaaattcccaaggatagctccaaagttcataaatgcatctt 740
Query: 541 tcactatagttaaatacacagttataaagtcaaagaaattttccatcctcagatttcttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcactatagttaaatacacagttataaagtcaaagaaattttccatcctcagatttcttc 800
Query: 601 atctgctctgactatccagctcagtatattgtacctttcccatatttctagatggtctat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atctgctctgactatccagctcagtatattgtacctttcccatatttctagatggtctat 860
Query: 661 tctggactggagtgagtatatgtaataacattgagtctgatgaggtcatggttcttgagg 720
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tctggactggagcgagtatatgtaataacattgagtctgatgaggtcatggttcttgagg 920
Query: 721 tacaattagatgtttctagtttgatgtatgtgttcaaagaaagggccccaaatctgat 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 tacaattagatgtttctagtttgatgtatgtgttcaaagaaagggccccaaatctgat 978
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 778
Length of database: 1178
Length adjustment: 10
Effective length of query: 768
Effective length of database: 1168
Effective search space: 897024
Effective search space used: 897024
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
