Query= MSMg01no123_d20.b1 MSMg01no123_d20.b1 CHROMAT_FILE:
MSMg01no123_d20.b1 PHD_FILE: MSMg01no123_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:42 2005
(425 letters)
>mm_chr7_69967255_69968079
Length = 825
Score = 754 bits (390), Expect = 0.0
Identities = 404/410 (98%), Gaps = 4/410 (0%)
Strand = Plus / Minus
Query: 18 gaattcgttatgtttctcatactgtatcttcttcatccctaaaattatccaagtataatt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaattcgttatgtttctcatactgtatcttcttcatccctaaaattatccaagtataatt 566
Query: 78 cagtactt--attttatatatcgtgtactaacatttattatatatcgtgtactaacattt 135
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagta--tgaattttatatatcgtgtactaacatttattatatatcgtgtactaacattt 508
Query: 136 atatcccttactgaacaataacagcaataatctaaacaaagctgtatgctccttgtcttc 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 atatcccttactgaacaataacagcaataatctaaacaaagctgtatgctccttgtcttc 448
Query: 196 tttcattttcttgttatcactcagtagtgccgtgccgtacgggtatcatttttacatctc 255
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 447 tttcattttcttgttatcactcagtagtgccgtgccgtacaggtatcatttttacatctc 388
Query: 256 agtagatttcttatatttatcttaagcttcttcactcattacttcatatatttcctaagg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtagatttcttatatttatcttaagcttcttcactcattacttcatatatttcctaagg 328
Query: 316 cttcattagttacaattttcctaacgctatttgctgacaagctccatgttatctgcatgt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 327 cttcattagttacaattttcctaacgctatttgctgacaagctccatgttatctgcaagt 268
Query: 376 tacttttaacatttttacttgatttggatggaggcagataaagctttctg 425
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tacttttaacatttttacttgatttggatggaggcagataaagctttctg 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_d20.g1 MSMg01no123_d20.g1 CHROMAT_FILE:
MSMg01no123_d20.g1 PHD_FILE: MSMg01no123_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:42 2005
(387 letters)
>mm_chr7_69829615_69830401
Length = 787
Score = 698 bits (361), Expect = 0.0
Identities = 376/381 (98%)
Strand = Plus / Plus
Query: 5 taagaattatccactaagtagagtggataattactaccatataattgattttcttcactg 64
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 205 taagaattatccactaagtagagtggataattactaggaaataattgattttcttcactg 264
Query: 65 atacgagcaaaagaatatttggatagtacaaagctcccattctagaagttagcattctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atacgagcaaaagaatatttggatagtacaaagctcccattctagaagttagcattctct 324
Query: 125 taatagtctgttaattggattgtaaaatcaaattaattcctcaaatgaaaaccttaaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatagtctgttaattggattgtaaaatcaaattaattcctcaaatgaaaaccttaaaat 384
Query: 185 tatcctgtgataccgaggaaaagaatatgaaccctattgttactgactcaaaacatttcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatcctgtgataccgaggaaaagaatatgaaccctattgttactgactcaaaacatttcc 444
Query: 245 actaaaatcacaaacaagatcaaaatgactattctttcacctcctgcttaatataatatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actaaaatcacaaacaagatcaaaatgactattctttcacctcctgcttaatataatatt 504
Query: 305 tgaaatcttacctagaggagtaacaaaagataatataaatgaaatgcaaaaagggaggaa 364
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 505 tgaaatcttacctagaggagtaacaaaagagaagataaatgaaatgcaaaaagggaggaa 564
Query: 365 agatgtgaaattatttttgta 385
|||||||||||||||||||||
Sbjct: 565 agatgtgaaattatttttgta 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
