| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-123H17.T7 (MSMg01no123_h17.b1) | MSMg01-123H17.TJ (MSMg01no123_h17.g1) |
|---|
| ACC | AG333073 | AG333074 |
|---|
| length | 1,229 | 1,243 |
|---|
length of high quality
(start - end) | 214 (197 - 410) | 282 (129 - 410) |
|---|
| definition | CHROMAT_FILE: MSMg01no123_h17.b1 PHD_FILE: MSMg01no123_h17.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:16 2005 | CHROMAT_FILE: MSMg01no123_h17.g1 PHD_FILE: MSMg01no123_h17.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:33:17 2005 |
|---|
| singlet/doublet | doublet | doublet |
|---|
| BLAST hit | unique | unique |
|---|
| Map location. | (103,522,365 - 103,522,578) | (103,405,220 - 103,405,501) |
|---|
| sequence | GGATTTTTNNNGGGCATTGGGCGCTAACGACTCCTAAGGGAGAGGATCCG
CGGAATTCTTTGCATTCACAGCTCCCCCGTGTTACTGGGGCTGTGTGTAC
ATGTGTACAAGTGACAGCCTCTAGAAGCGATTCTGTCACTATCAGGAACC
CACAAACAACAGGATAGTTTTCAAGGTGAGGCAGGGCTTCTCCCCTCTCT
CAGAACCAATGGAGCCTGAAGAGAAATCTCACCGGCACATCCTGCTGCAG
CATACCAAAGGGACACTTGGGAGCTCAGGGATGCAGACATATGTAATATG
CACACCTGAGACCAGACTCACATGTGCATGGAACAGGAAGTACATACTCT
GACACTGCAGATCCTTGCATGACCATGAAATGTCAAACAGATAGACAGAC
AGACAGACAGATATTTTTTTTTACACAGAAACACACACACATACGACTCA
GCCTACTATGCATTTTTTTTTTTCCCCCCCCCCCAANAAGGTATTCCGTT
CACAAAAAAAAAGGGGGGTGTTTTATATTCTCTGCTGCTGAGTACGTGCT
CTGTATTAGATTCAACCTGATCATCTCATAGAACAATCCCATCTGTTAAG
AGACCCCTCTTTATCATGTTTTCCTAATTTCTTCTTTGCTAGAACGAAAT
GCTGGTCAGTGCGCCTGGTAAAATTTTGATTATCTATTTCCTTGATATTT
TGGTAACTTTGTCTCAAGTACACCTGCTTACGAAGATCGTTTCTCTTATA
AGTTACGAATGATCATTTATCTTATAACGCCTCGATCGGTTTCCATTATC
TATCTTTTTTCATTATGTTTCTAGCATAGTTTTCTCCGGTATCTGTCTTT
TTTTACATTCCATTTTTCTTTGAAATTTTTTGAACTCTGTATTTCTCTTT
GCTTTTTCATCTTGTTTCCTTTCATTTTCTTATATTGTTCTTCTCTCACT
TTCTTCCATTAAATTGATTTCTATTCGTCTCTTTTCTTTGTTCCACTTAT
TATCATCTTAGTCTTCTTTTGTTCATTCTTTCTCTAATTCTCTTCTTCTT
CTCTTCTATCTTTTTTTCTTCTTCACAACAACGCCTTTTGCGTATCTCTT
TTCTTTACTCCGCTAATCCTTTCTTAACTCTTTCTCCCACTTTCTATTTG
TTATCCTTCTCCATATGTATTTTCTTCATGACTTTAACTCTTCCTTGTTT
AATACTCTCCCTTCTTTTTCTATTATTTA
| GTTATACTTNNNTAGAGGGGAGCCGTGGGCGCCXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCCTTTACAGGACCTCAGGGATTTGGC
CCCAGGAGCATAAATGCTTTGTAAGGGCCCCATATCACAGATACCAGGAG
GTGTTCTGACAACAGTTAGGAGCCACACAGCAATCTTGGTGACTCCTCAA
AACAGTGAGAGGGGAATCGATACTGAATCTTTTCCTGACTATGTATTGTC
AGCCAAGTTCCAGCTCTTTTCTATATCACTGCTCCTTTCTGTAAAATGGG
GACTGTAGAGACTACTTGACTACAGGGGTTGGCACCAAGGATGATTTGGG
GGAAGCAAATGGTATTAAAGTACAATCGCTCTTTTATGCCAATATGTCTA
CCCATAGAATTACCTTGAAGTGAACCAAGGGCTATTTGGAAGAGCACATA
GGGCCTTTTGTTTTTTTTCTACCTATATAAGGAAAAGAGGAAGGAGGACT
CAAGATTCTGACTGAACATGCTGGACCAAGTTCACCAGTATAAACCTGCC
ACTAGATAGGCTATGCCAGAGCTTCTCTGGATCCTTCTGTACCTGGTTTG
TACAAGTCTTTCGGATAGCAACTCATACATAACCCCTGTCTTCCTATCAG
GCGCTTGAGGCCTCCACATCTTTCTAAACTACCATGATGGTGCTAGTCGC
TCTGTCTGATATTTATCGTCCTAGTAAGGTCCCTTGCACACCCTCTTGCC
CTCTTCTCCAAAGTCTGTTGCCCATCGCCCTGAACGTTTTTGCTGCCTCC
TCAACTCTCTGAAGACTGGTTCCTTCCCCTGTTTCATCCCCACTGTTCCC
AGAAAACCCCCTCCCTAATCCTAGGTCAAATGCGTAACGGTATTGCTTTC
CCTATCCTTTCCCCTCTTGATTCCCCCCCTTGCCTATCCCATATGGTTTG
TTTAAAGCTAATTCCCTAACCCTGGTTCCTTTGTTTCCGCTTGAAAAATA
ATTCAATCCCTTTCCCACTCTCTTTCCTCGTGATCCACCTTCTGTGTTCC
TGTAAGTGTTTAATTCTGGCCCCTCCCCATTTTTTCGTCTCTTATACTCT
ATTGTTTATCTTCATTATTTCATTTTATCGTCCCTTATGCCCCTCTCTCT
TAAAATTCCTCTCTAATCCTATAATCTCTTTTGGGTTACCCCCTCTTAAC
CTCTCCTCCCTTTATATTTCTTTTTCAATAACAATTATTTCTT
|
|---|
| quality values | Open.Hide. 8 8 8 8 8 11 9 3 0 0 0 3 6 8 6 8 8 8 8 8 8 15 13 12 7 7 8 8 12 19 19 9 8 8 8 8 8 8 22 19 24 28 28 28 31 36 36 36 39 39
34 33 33 33 37 37 47 37 37 42 36 36 34 33 33 33 36 33 28 28 28 33 37 23 21 20 12 12 12 10 12 10 10 12 11 15 16 16 20 23 29 30 28 28 28 28 28 28 33 37
29 28 28 36 36 33 33 33 29 28 25 25 28 19 21 11 11 10 10 10 9 9 8 8 8 8 15 22 36 37 37 37 37 37 37 36 36 39 39 47 53 43 39 36 36 23 23 11 11 11
25 25 48 43 43 43 43 40 33 28 30 41 37 43 37 34 34 34 36 36 37 41 41 34 34 34 34 33 25 32 28 43 28 27 20 9 9 23 19 10 10 10 10 10 10 10 12 23 27 34
41 32 28 28 33 37 32 35 32 37 41 43 43 25 25 23 37 37 39 30 39 39 57 57 57 57 42 42 31 31 25 30 24 30 30 19 20 32 32 43 43 42 44 46 48 47 47 44 44 44
44 48 44 43 43 43 43 47 47 47 35 35 31 33 33 42 42 57 36 36 23 23 27 37 38 32 32 20 20 27 34 44 43 43 29 29 29 32 32 35 50 50 54 52 52 52 52 52 52 52
52 52 52 52 43 43 32 32 17 32 32 43 43 38 38 50 50 43 50 43 43 43 44 43 43 35 35 35 50 50 42 42 32 32 32 42 42 57 36 30 18 15 15 20 20 32 36 43 44 39
40 37 28 28 30 37 31 32 30 37 37 36 36 43 44 34 24 18 18 24 27 32 17 17 15 29 29 32 32 36 43 31 28 23 23 23 28 28 25 25 31 32 30 28 29 25 23 23 23 23
23 23 23 23 28 28 23 23 14 12 12 11 11 10 18 14 27 17 15 12 8 8 9 9 12 21 15 17 19 24 28 31 31 17 19 14 24 24 32 15 15 11 12 11 11 11 12 12 19 12
12 12 21 12 14 14 28 28 28 24 25 21 21 18 16 20 29 31 32 30 20 18 18 11 11 13 18 21 19 19 12 9 8 7 8 3 0 3 10 19 12 10 8 8 6 6 8 8 9 8
8 8 8 8 11 15 16 15 15 14 14 12 11 9 9 9 9 6 6 6 6 6 8 9 19 17 9 9 9 9 12 19 10 8 8 6 6 11 8 18 11 11 11 21 12 14 12 13 13 14
22 25 11 10 10 8 8 8 8 9 10 10 10 10 9 9 9 9 10 12 12 10 9 10 10 10 17 10 10 8 8 10 16 11 11 11 11 13 11 12 11 11 10 13 16 21 13 12 10 10
12 15 12 12 11 8 8 8 8 10 10 10 9 8 8 8 8 6 6 8 8 10 10 10 17 11 12 11 11 12 21 24 23 20 11 12 12 10 10 8 8 8 10 9 9 9 9 9 9 9
10 10 10 10 8 8 8 8 8 8 8 8 8 8 10 12 11 8 8 8 8 8 8 9 11 9 9 9 10 10 8 10 9 9 9 9 9 10 11 12 12 10 10 11 11 11 11 9 9 9
10 10 8 8 8 8 8 9 9 8 8 9 9 8 8 8 8 8 8 10 8 8 8 8 9 9 8 11 11 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8
8 8 8 8 6 6 8 8 10 8 10 10 8 8 8 8 8 8 8 8 10 10 11 12 6 6 8 8 8 8 8 6 6 8 8 6 6 8 8 8 8 8 8 9 9 9 9 9 9 13
12 15 14 9 9 9 9 8 8 8 10 8 8 8 8 8 8 12 11 11 10 11 10 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 10 10 11
11 10 10 10 8 8 8 12 10 11 9 9 10 10 8 12 6 6 8 8 8 8 8 8 9 13 10 10 8 8 8 8 8 9 9 9 10 8 8 8 10 8 10 6 6 8 8 12 12 10
10 8 8 8 8 8 8 8 8 6 6 8 8 8 8 10 7 7 8 8 10 8 8 8 10 8 10 14 11 11 10 8 8 8 8 10 11 11 11 11 8 8 8 8 8 8 9 9 9 8
8 8 8 8 8 9 9 9 10 10 11 9 9 9 10 10 10 12 13 10 8 8 6 6 6 6 6 8 8 8 8 8 8 8 10 12 10 13 10 10 8 10 10 8 6 7 10 8 9 9
10 11 8 8 8 8 6 6 8 8 8 8 10 10 8 10 8 8 8 8 8 11 11 11 14 13 18 11 10 10 8 8 8 8 8 8 8 9 9 8 10 12 10 8 8 8 8 10 8 10
10 8 8 10 14 8 8 6 6 10 8 9 9 10 10 11 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 9 6 6 8 8 10 10 6 6 6 6 8 10 8 8 6 6 8 8
10 18 15 15 15 12 10 10 10 9 9 8 8 6 6 8 8 13 13 10 11 7 6 8 8 9 9 10 10 8 8 10 9 9 9 10 10 10 6 7 8 8 8 8 8 8 11 11 9 9
12 11 9 8 8 8 10 8 10 10 12 8 8 9 12 9 8 8 8 9 8 10 10 10 10 10 8 8 8 8 8 9 11 15 9 9 10 12 10 8 8 6 7 10 10 12 9 10 10 10
8 8 8 8 8 8 11 8 9 9 11 8 12 8 8 8 8 10 8 8 8 10 10 8 8 6 8 6 6 | Open.Hide. 8 8 8 8 8 8 6 6 3 0 0 0 3 6 6 6 6 8 8 8 8 8 7 6 6 6 13 7 11 16 15 10 8 9 8 9 9 16 15 17 8 8 10 22 19 28 20 24 12 15
10 10 10 24 22 28 28 29 29 36 36 36 47 47 50 48 50 50 37 37 25 21 13 9 8 8 8 8 8 9 11 11 10 10 10 13 14 16 15 21 19 37 37 50 36 36 53 53 53 53
44 59 43 39 36 32 32 33 31 37 29 21 17 8 8 8 8 9 9 8 6 6 6 6 8 11 11 12 15 27 26 30 33 33 33 33 50 44 31 30 17 17 17 19 28 30 48 48 48 57
57 57 43 43 39 42 47 42 42 43 43 36 34 34 41 42 43 43 48 48 48 43 43 43 43 43 46 37 42 37 37 37 42 39 48 57 44 41 24 13 12 19 19 37 37 40 40 39 44 43
36 44 28 24 20 24 32 42 57 57 59 54 54 57 59 59 57 54 54 54 59 54 54 54 59 57 57 52 52 52 57 57 57 57 57 57 59 57 57 57 68 68 68 57 57 52 57 52 57 57
57 57 57 57 57 57 57 57 57 57 52 52 52 45 45 52 57 59 59 57 57 57 57 57 57 57 57 59 59 57 57 52 52 57 57 59 57 57 57 57 57 57 57 57 57 59 59 59 59 43
43 39 43 43 43 43 42 42 35 43 43 57 57 57 57 57 59 59 57 57 57 57 57 57 57 52 52 52 52 57 57 57 57 37 43 42 43 43 42 42 52 52 52 54 54 52 57 52 52 43
43 43 42 43 42 43 52 52 50 50 43 43 43 43 50 57 57 44 44 43 43 43 43 43 43 57 43 43 43 47 47 48 57 57 57 57 46 43 43 59 59 59 59 57 59 48 48 48 57 57
57 57 54 57 44 25 19 12 20 20 15 12 11 8 8 8 8 15 15 35 35 44 44 42 43 43 48 43 39 39 35 35 35 43 43 43 42 35 35 35 40 39 39 37 37 39 47 36 47 37
39 28 25 18 15 28 22 28 14 14 12 11 11 17 15 7 6 6 6 8 6 6 8 8 19 18 34 28 39 39 41 47 37 37 32 28 21 23 15 15 18 18 19 18 18 12 12 11 10 10
9 9 9 9 10 10 15 19 25 32 31 35 34 34 35 35 35 34 34 28 28 28 23 20 11 11 11 23 21 28 32 32 35 35 37 32 30 22 22 29 29 39 34 28 21 21 22 19 17 24
14 12 16 22 23 32 31 22 24 22 24 24 30 30 24 19 19 22 24 28 24 24 28 33 33 36 28 28 34 31 37 20 20 11 11 11 23 23 40 40 32 28 24 21 21 21 18 23 10 10
10 17 17 25 26 14 14 23 23 21 11 9 9 11 12 24 19 12 10 10 10 12 12 13 15 23 29 28 28 28 28 37 31 31 22 21 21 15 20 19 16 14 23 23 33 34 37 30 15 10
10 12 17 19 32 39 37 26 21 10 13 13 10 10 10 12 12 13 13 27 24 32 23 16 15 12 12 9 9 9 18 18 20 19 24 28 14 12 12 12 11 11 19 18 17 17 9 9 8 8
8 14 14 19 24 30 28 19 14 10 10 10 9 10 9 9 9 9 9 9 10 10 10 10 10 10 17 22 18 11 11 16 13 15 15 16 16 16 10 11 10 10 10 19 21 16 16 13 8 8
8 8 8 8 8 8 8 9 10 10 10 10 11 14 13 17 11 12 11 16 8 8 10 8 8 8 10 9 10 10 10 12 13 10 10 10 9 11 23 23 21 14 12 15 9 9 8 8 8 8
8 8 8 8 8 9 9 11 12 14 14 11 10 10 10 10 13 10 11 10 9 10 8 8 8 9 8 8 8 8 8 10 10 12 8 8 8 14 10 10 9 8 10 12 13 12 8 8 9 9
10 13 8 9 8 8 8 8 8 8 13 12 13 8 8 8 8 7 9 8 10 8 8 8 8 11 11 11 12 8 8 7 6 6 8 8 8 8 9 9 9 9 11 9 9 9 15 16 14 14
12 12 10 11 10 11 11 13 13 16 15 10 8 10 8 8 10 10 10 10 13 11 11 13 14 19 12 9 8 8 6 6 8 8 10 8 8 10 13 10 13 13 11 11 11 10 10 10 10 10
8 8 10 10 9 10 10 10 8 8 11 12 12 13 11 11 9 9 9 9 16 16 13 9 9 12 10 12 8 8 8 8 8 8 10 11 11 12 10 11 8 8 8 8 8 8 10 12 8 8
8 8 8 8 8 8 9 10 10 10 10 9 9 9 9 10 10 12 12 9 9 10 10 10 7 8 10 10 10 9 9 8 10 8 8 6 6 8 8 8 6 6 8 8 8 6 6 6 6 8
8 8 8 8 8 6 7 11 8 8 8 8 8 8 8 8 8 8 8 12 12 9 9 9 9 10 11 9 8 8 8 8 8 8 8 6 6 8 6 8 8 8 8 9 8 8 8 6 6 8
6 6 6 6 10 8 8 8 8 8 6 6 7 8 8 8 8 8 8 6 6 6 6 11 10 8 6 6 8 8 9 9 8 8 8 8 8 6 6 6 7 7 8 10 9 8 8 6 6 6
6 8 8 9 13 15 16 10 8 8 13 13 15 10 8 8 8 8 6 6 6 8 10 8 8 7 7 8 8 9 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6
6 6 8 8 8 6 8 10 8 10 10 13 10 8 8 6 6 12 15 12 12 8 8 8 8 8 8 6 6 8 6 6 8 8 6 6 6 8 8 11 11 11 11 |
|---|
