Query= MSMg01no123_o09.b1 MSMg01no123_o09.b1 CHROMAT_FILE:
MSMg01no123_o09.b1 PHD_FILE: MSMg01no123_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:14 2005
(331 letters)
>mm_chr7_61415356_61416086
Length = 731
Score = 586 bits (303), Expect = e-172
Identities = 321/331 (96%), Gaps = 7/331 (2%)
Strand = Plus / Minus
Query: 1 ctctccagtttgtttaatttcatgtaatagaagacaaagtcatagtgcaaattttaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctctccagtttgtttaatttcatgtaatagaagacaaagtcatagtgcaaattttaatta 417
Query: 61 ttagaccactgtgtaacagactttgtgatatatacagcatgatgtaacagataaccccct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 416 ttagaccactgtgtaacagactttgtgatatatacagcatgatgtaacagataaacccct 357
Query: 121 aaagaaatggaaagtgtagaagaattaataacaaccatggctttaaagtgactttacaca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaagaaatggaaactgtagaagaattaataacaaccatggctttaaagtgactttacaca 297
Query: 181 ttaaacaatgtgaactgctagtgattaatttaatgtggttaaataaaaggttgaggaaaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttaaacaatgtaaactgctagtgattaatttaatgtggttaaataaaaggttgaggaaaa 237
Query: 241 catctctgtacaaaaacctcaaataggtttctggtctttttccaaaactcaaaactcaaa 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 236 catctctgtacaaaaacctcaaataggtttctggt-------caaaactcaaaactcaaa 184
Query: 301 agtgcttgactttcaacaatggcttccacta 331
|||||||||||||||||||||||||||||||
Sbjct: 183 agtgcttgactttcaacaatggcttccacta 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_o09.g1 MSMg01no123_o09.g1 CHROMAT_FILE:
MSMg01no123_o09.g1 PHD_FILE: MSMg01no123_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:15 2005
(239 letters)
>mm_chr7_61224864_61225501
Length = 638
Score = 406 bits (210), Expect = e-118
Identities = 237/252 (94%), Gaps = 15/252 (5%)
Strand = Plus / Plus
Query: 1 cttttaaatgtggcagagaaatagccagacaaaaaaacctgatagacagacaacagtcag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 cttttaaatgtggcagagaaatagccagacaaaaaa-cctgatagacagacaacagtcag 259
Query: 61 aaaataaacaagtaacagacgacaaactcaaataaatgacagaaagatgataaagacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aaaataaacaagtaacagacgacaaactcaaataaatgacagaaagatgataaagacaaa 319
Query: 121 ttgatgacagatgtgtgataaatgatagatatata----ta--tagatagataga-a--- 170
||||||||||||||||||||||||||||||||||| || |||||||||||| |
Sbjct: 320 ttgatgacagatgtgtgataaatgatagatatatagagatagatagatagatagatagat 379
Query: 171 agatagagata----gatagaaagatagagatagatagatagatagatagatagatagat 226
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agatagagataaatagatagaaagatagagatagatagatagatagatagatagatagat 439
Query: 227 agatagatagat 238
||||||||||||
Sbjct: 440 agatagatagat 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 638
Length adjustment: 9
Effective length of query: 230
Effective length of database: 629
Effective search space: 144670
Effective search space used: 144670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
