BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-124A12.T7 (MSMg01no124_a12.b1) | MSMg01-124A12.TJ (MSMg01no124_a12.g1) |
ACC | AG333488 | AG333489 |
length | 1,251 | 1,281 |
length of high quality (start - end) | 423 (29 - 451) | 644 (125 - 768) |
definition | CHROMAT_FILE: MSMg01no124_a12.b1 PHD_FILE: MSMg01no124_a12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:34:34 2005 | CHROMAT_FILE: MSMg01no124_a12.g1 PHD_FILE: MSMg01no124_a12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:34:34 2005 |
singlet/doublet | singlet | --- |
---|
BLAST hit | unique | no hit data |
---|
sequence | NNGGGGCATTGGCGCTATAGACTCCTAAGGGAGAGGATCCGCGGAATTCA
GGCTGTCAGCTTGCGCGATTAATGCCTTTGTGCGCTGAGTCACCTCCCCA
GCCGACACTATTGTTTTTAAGCCTTCCCTTAGGAACGCCCTCCCCGTCAC
AGAGCTCCAGTCTAGGCTCTGAATGGCAGCAGCACTGAGGTGCACTCCCC
CTCGTGATTAGCATGGACTAAATACCGACTGCTATAAATGCTGCGCAAGG
GTTGGAGAGGTGCTCAGTGGTTAAGAGTGTTTGTGTGCAGCCCTGAGGTC
TAGAGTTTGGATCCCAGCGTCTACGAATGACCTCTCATAGGCCTGCAGCC
ACAGTTTGAGGAGGGGGAGACAGCAGGCTTGCTGGGCTTTACCGCCTTCC
ACTCTGGCTGAGAAAAGTAAGTCCCAGGTTCAGGAAAGAGGCTGTCTCAT
ATTTTTCTGCGCAGGATAACAGAAAAGACACCCAGACACATCTCTGGGCT
CCATGTGCAAAGAGACATGCATCCTCACAAATTTGTGTGAATATACTCCT
CATACAAGCACACAAGAAAACCCTAAGCCACACGACATGAAGCTCCATTT
CAGCAAATTACCACTGCATATATTTTCTAAAGGAGACAGAGGCTAAGCAT
TGAACTATATATTCAAATTGACATAAGAAGATAGCCAGGCTGGTAGTGTC
GCCCAGTAAAGCATTTACCTAGCACACGTGAATAAGGTCCTGAGTTCAAA
CCCTAGCACCGACACAAACTCCATCTAACTATCACCACCAAAAAACTGGA
GATGTTCCTGTAGACTGGCTCTTTTCTGTTTATTGACTTTAATCACTTTG
CCCCTTCAAATGACCCATGTGAAAAAAATAACCTATTACATCATCTTTTT
GGAGCTTACAAACTTATAAATTTTGGAAAGTAACCCAGCATCGATCCCCT
TCTTTTACTTTAAAAGTTTTCACCACGTGTGAAGTGGTCAGGCCCTCCGG
CCCTAAATCGTTCCCTCTTTCCAAATTTTTTTGGTGCATTCTCCCCGCAC
GGGTCCGGGCTGCCCCTTTAAACTTCCCCATCCTTGGAGCGTGTGGACTT
TTAAAAATTTGGGACCCTGGTCCATAATCTCCAAAATGTTGGGCCTTATT
TTTTTCAACCTCTATTTAATTACAGGGATACCCGCCCGGTTATACCTGTC
TCTCCCCAAATGGGTCCATCTCATATTCCTCATTCAAATGCGTTTCTAAA
C
| TCTTTTTTTAACAAGTGAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCACTCTTAAGCTTTTGCAGAAAACCCAGG
GTTAGTTCCCAACATCCCTATGGAGACTTACAACAGCTTGCTACTCCAGT
TCCATGGAACCCAATTTACTCTTCTGACCGCTGAGGACTCCTGCATGTAC
CTCATGTGCAAACCTACACTCAGAAACAGACATACACATAAAATAAAATA
AGTAACCAGGCAGTGGTGGGGCACGCCTTTAATCCCAGCACTTGGAAGGC
AGAGGCAGGCAGATTTTTGAGTTCAAGGCCAGCCTGATCTTCAGAGTGAG
TTCCAGGACAACCAGAGCTACACAGAGAAACCCTGTCTGGAAAAAAACAA
AACAAAACATAACAAAAAATAAATTAAATAAAATAAGTAAGTACATATTG
ATTTTTTTTTCTGGCATGGTATCACTTTGTTTCACTTGCATGTCCTAGAA
CTCATAATGTAGATCAGGATGGCCTCAGAGGAGATCTACCTGTCTCTGCC
TTCCAAGTGTTGGCTTAGAAAGCATACATCACCACACTAGCTTTTAGAAA
GAAGGAAAGAGAGAAAGAGAGGAAGAGAGGAGGAAAGAAAGAAAGAAAGA
AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAC
GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGG
AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA
GGAAGGAAGGAAGGAAGGAAGTTTTTTCATCTCTTCTCTCTTCTCTTTAC
CCTTTTCCTCCTCTCTTTTATATTATTTTTTTCTTCTCTTCTACTCATTC
CTCTCTATACTCTTTTCTCTCTTTTCCTTTTATCTTTTTTCTATTTTTCT
TCTTCTTATTTCCTTTCTTTCTACTTTCCTCCCTTACTCTTTCATTACCT
TTCTCAATTCACACTACCTCTCTTTCTTCCCAACTCATTCTATTTTCTAT
TTCCATCCTCCTATTATTTTACTTCTTTTTTTCTCTTTTCATTTTTTCCC
TCCTTTATCATTTCTATCTTTTCAATCCCTTTTTCTATCTACTCTTTCCT
TCTTATTCTTCATTTTTCTTTTTCTCTTATCTTTTCCCCCTTTTCTTTTT
GATATGTACTATTATTCCTTCTAATTTCTTTCTACACCTCATTTTTACCT
ATCTTTTATAATCTTTATGTAATTCTCGTTC
|
quality values | Open.Hide. 0 0 3 6 6 6 9 9 9 9 8 8 12 19 22 15 12 8 8 8 8 9 9 8 8 13 8 8 8 22 26 33 36 33 36 34 42 36 37 34 33 39 39 33 43 43 42 42 33 29
29 33 34 34 28 35 30 30 33 33 37 37 23 21 14 13 13 10 12 12 12 22 25 31 37 30 37 29 32 31 36 50 50 42 42 42 37 37 42 42 36 36 36 36 36 47 36 48 43 40
40 41 41 25 25 11 10 10 9 9 9 10 10 13 23 25 30 33 33 33 30 43 39 39 39 42 47 47 39 39 39 43 48 57 57 48 48 42 48 48 48 48 48 48 48 41 41 42 42 48
48 54 54 54 47 47 48 47 48 48 47 47 47 47 47 47 44 46 46 46 48 57 57 57 57 57 57 34 34 20 27 27 42 40 57 57 57 57 57 57 57 44 44 44 48 57 57 57 57 57
57 57 57 57 57 57 51 57 57 57 57 52 54 57 57 57 57 57 57 57 57 57 59 52 52 54 59 59 57 57 54 57 57 57 57 57 57 57 57 57 57 57 57 57 52 52 52 52 57 52
52 52 57 57 57 57 57 57 57 52 52 52 52 52 43 43 43 57 52 52 52 57 57 57 52 52 57 52 52 52 57 57 57 57 57 57 57 52 52 52 52 45 57 57 59 57 57 47 44 39
43 35 43 43 57 59 59 59 57 57 57 57 57 57 57 52 52 57 57 57 57 57 57 57 57 52 52 52 59 59 54 54 57 57 57 57 57 59 57 57 52 52 52 57 57 57 52 57 52 52
52 57 57 59 59 59 50 50 54 54 54 57 57 50 43 36 28 32 36 37 35 35 32 32 42 42 43 44 44 57 57 48 44 44 43 43 44 44 57 59 59 59 57 44 43 41 32 22 19 12
12 12 19 30 26 32 25 33 29 31 25 37 37 46 46 54 48 43 43 39 39 39 39 33 33 30 32 32 30 29 29 30 37 30 39 39 43 43 43 43 43 43 43 32 26 17 14 12 15 11
11 12 12 12 12 21 13 10 10 9 9 9 9 10 10 12 15 28 25 35 35 37 32 30 30 24 30 22 20 20 23 32 28 23 23 12 13 8 8 8 8 8 9 15 15 20 14 13 20 32
32 47 46 47 47 48 48 48 48 48 48 48 48 57 48 48 48 32 34 19 19 19 27 32 42 39 43 43 43 43 43 46 48 57 32 24 14 14 14 28 32 59 59 54 54 54 57 57 57 48
48 48 40 40 35 32 28 31 28 30 30 32 30 28 25 25 25 25 25 37 28 36 33 33 34 34 28 24 24 22 19 12 12 12 21 25 28 23 24 20 32 23 28 30 34 30 30 39 43 40
36 35 39 39 43 43 43 43 43 43 43 43 46 46 46 43 43 37 37 47 44 54 54 25 21 9 9 9 19 17 35 35 39 32 36 30 25 25 30 36 36 35 39 32 32 28 42 42 57 44
57 48 48 43 43 43 43 43 43 43 43 36 36 16 15 10 15 15 29 23 33 25 23 28 28 23 23 23 23 23 30 37 21 20 11 11 11 20 23 28 30 34 39 33 30 28 23 18 11 10
11 18 22 33 36 37 32 25 20 14 16 16 20 17 21 26 24 20 15 18 15 17 15 24 15 21 16 17 17 19 19 28 26 25 15 14 12 19 15 25 28 24 24 28 18 16 16 10 9 9
11 11 14 19 16 28 18 17 11 11 11 13 11 11 12 13 10 13 8 8 8 8 8 8 8 8 8 10 8 8 7 6 8 8 11 10 8 10 10 8 8 8 9 12 9 9 9 11 13 18
19 11 15 12 29 16 16 15 15 11 11 11 11 11 18 21 18 17 14 15 15 16 12 12 12 10 26 21 37 22 16 9 9 9 10 12 13 17 12 14 11 10 8 8 8 12 16 22 17 11
8 6 7 6 6 10 8 10 13 15 19 13 12 8 8 8 8 8 8 8 10 10 15 26 22 23 15 15 9 11 8 8 8 8 12 10 11 11 8 8 8 8 8 8 10 12 15 20 20 16
15 15 15 18 16 19 18 13 13 10 10 15 13 10 10 11 17 19 18 18 11 11 13 10 11 11 17 21 13 14 14 12 12 11 15 10 10 11 11 11 11 10 10 10 10 10 10 8 8 8
8 8 10 10 13 10 9 11 8 8 6 6 8 8 15 9 9 8 8 10 8 8 8 10 13 9 9 9 8 8 8 8 8 10 19 17 11 8 8 8 10 8 8 6 6 7 8 8 9 9
9 7 7 8 8 8 8 8 8 8 8 8 9 11 10 11 13 11 10 9 9 10 10 9 10 9 10 10 11 12 23 14 11 9 8 8 8 8 6 6 6 6 10 8 13 13 10 9 9 9
10 9 9 12 9 9 10 8 8 8 8 10 13 11 10 9 9 9 12 10 9 10 15 13 15 15 17 16 17 10 10 10 10 10 9 9 6 6 6 6 10 8 8 8 8 8 8 10 11 11
11 10 10 10 6 6 6 6 8 8 10 10 10 11 11 9 10 8 8 8 8 8 8 8 8 8 8 8 10 7 7 8 10 10 8 8 8 8 9 9 9 10 10 15 12 8 8 8 11 10
10 24 19 15 8 8 8 9 10 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 12 8 8 8 8 8 8 8 10 8 8 6 6 6 8 8 8 8 6 6 10 10 12 10 10
10 11 11 8 8 9 13 13 15 9 9 6 6 6 7 8 6 6 8 6 8 8 8 8 8 8 10 10 13 8 8 8 8 8 8 15 10 11 8 8 8 8 8 12 10 12 13 12 12 11
11 | Open.Hide. 9 9 9 9 9 19 21 10 6 6 6 6 6 6 6 6 6 6 6 8 8 6 6 6 6 9 10 15 15 8 8 6 8 7 8 17 17 20 20 21 30 30 33 33 33 28 28 31 36 36
36 37 36 37 36 28 28 33 31 38 37 37 37 41 37 37 41 47 30 21 17 9 9 9 9 9 9 9 9 9 9 9 12 24 26 30 24 22 32 37 48 53 53 57 57 57 50 57 53 53
36 36 36 36 36 33 33 33 50 47 41 23 23 11 11 10 10 10 10 10 10 10 10 11 21 24 33 33 33 36 47 37 41 28 25 25 22 33 42 47 47 47 47 47 47 53 48 48 48 50
51 51 54 54 54 54 57 57 57 57 68 68 68 68 50 51 51 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 47 47 32 32 26 32 39 42 43 57 57 57 57 57 57 68 68
68 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 52 52 52 57 57 59 59 59 59 52 52 52 57 57 57 57 57 57 59 59 68 68 59 59 57 57 57 57 57
57 57 59 59 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 62 62 62 62 62 62 52 62
52 52 52 62 62 62 62 62 62 62 52 52 52 62 62 68 68 62 62 62 62 62 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62
62 62 62 62 62 62 62 62 62 62 62 44 44 31 31 31 43 43 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62
62 62 44 39 26 13 12 12 12 12 12 12 23 23 39 43 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 52 52 62 62 62 68 68 68 68 68 68 62 62 62 62
62 62 62 62 62 68 68 62 62 62 44 43 27 21 21 19 28 14 14 13 13 39 20 39 39 62 44 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 38 38 13 13 13 38
38 52 52 62 62 62 62 62 43 44 43 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 52 38 38 32 32 26 44 44 62 62 68 59 59 59 59 59 57 57 59 59 59 59 59 68
68 68 68 68 68 57 57 57 57 57 59 52 52 52 44 44 52 52 52 59 41 59 52 52 57 57 57 59 59 57 57 57 57 57 52 52 43 38 32 15 12 15 24 27 27 44 44 29 38 38
43 43 37 43 43 52 52 52 52 43 52 52 52 52 46 43 43 35 35 32 37 36 43 32 24 24 12 12 12 24 22 16 11 11 12 24 32 43 44 43 43 44 44 42 42 35 37 35 37 37
42 42 44 44 47 43 39 39 37 37 37 39 39 30 30 30 30 30 30 39 32 39 35 39 33 30 30 32 39 39 48 42 39 35 35 32 30 30 25 25 28 33 33 43 43 43 15 15 10 8
8 17 26 30 30 30 30 32 28 22 22 34 30 30 30 33 33 28 32 28 30 28 28 25 28 25 34 32 32 30 28 23 23 20 22 23 28 22 28 28 34 25 28 25 25 22 30 33 37 26
19 13 13 13 19 17 30 37 37 36 36 36 29 31 16 16 16 18 18 20 22 18 15 12 15 14 17 18 22 37 37 32 27 25 30 30 28 24 30 28 28 25 28 22 24 22 22 16 12 11
13 12 18 18 22 22 25 28 28 20 17 17 19 12 12 10 10 10 9 10 10 10 10 10 16 13 12 9 7 10 8 8 8 10 9 8 8 8 8 8 8 8 9 10 9 9 10 10 10 10
10 10 10 10 10 7 6 8 8 8 8 8 8 7 6 8 8 11 11 13 8 8 8 8 8 8 8 11 11 8 10 10 10 8 8 8 6 6 8 8 11 12 10 8 8 8 8 8 8 8
8 8 7 6 8 8 8 8 8 10 8 9 9 11 10 8 8 8 8 8 8 8 13 10 12 10 12 13 16 8 10 7 7 7 7 10 10 12 9 8 8 8 8 8 8 10 14 12 12 11
8 8 8 8 8 8 6 7 10 8 8 8 8 8 8 10 8 8 8 8 12 12 8 8 8 8 8 8 8 8 10 11 11 11 11 10 10 11 11 11 11 11 11 10 8 8 8 8 8 8
12 12 12 11 11 11 10 8 8 10 10 8 8 10 10 9 9 9 9 8 10 10 10 9 10 11 12 12 8 8 6 6 8 6 6 6 9 8 11 8 8 9 13 12 10 9 10 10 9 8
8 8 8 9 9 10 13 10 10 10 10 10 11 9 9 9 9 9 10 12 12 11 9 9 7 8 8 8 6 8 10 10 13 13 10 10 8 8 9 16 17 10 13 10 10 10 10 9 8 8
6 6 8 10 8 6 6 8 6 6 8 7 8 8 8 10 10 13 17 11 11 8 8 8 8 8 8 8 8 11 11 11 11 13 18 21 12 15 8 8 8 8 8 8 8 8 8 8 8 10
8 8 10 10 8 8 8 13 15 8 8 10 10 12 11 13 10 12 12 10 8 8 8 9 10 9 7 8 8 8 8 8 8 17 11 11 11 19 24 19 15 9 7 8 7 6 8 6 8 6
6 6 8 8 8 8 6 6 8 8 8 8 10 10 9 9 9 9 9 8 8 8 8 8 8 8 8 8 13 8 8 8 6 6 6 6 8 9 9 11 10 16 10 10 9 9 6 6 8 8
8 8 8 8 8 10 8 8 6 6 8 8 9 9 9 10 10 9 9 9 10 10 10 10 8 8 6 6 6 8 6 |