Query= MSMg01no124_k13.b1 MSMg01no124_k13.b1 CHROMAT_FILE:
MSMg01no124_k13.b1 PHD_FILE: MSMg01no124_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:03 2005
(431 letters)
>mm_chr7_70597929_70598759
Length = 831
Score = 781 bits (404), Expect = 0.0
Identities = 425/432 (98%), Gaps = 2/432 (0%)
Strand = Plus / Minus
Query: 1 cacgtacatcacattgctattaactgtagttagtggggttcgcactaaaactctttaatg 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 631 cacgtacatcacattgctattaactgtagttagtggggttcacactaaaactctttaatg 572
Query: 61 caaaca-tttttttgccaactctatattattatgttatataatatcataatctggttgat 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 caaacattttttttgccaactctatattattatgttatataatatcataatctggttgat 512
Query: 120 gtgtgacagctttactagatcatctcacagatgtctcccaacttctgtcttaaagagtcc 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 511 gtgtgacagctttactagatcatctcacagctgtctcccaacttctgtcttaaagagtcc 452
Query: 180 aacttcccatctctgctacccctgagctgctgtgcaggaatggggagagccttcctccct 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 451 aacttcccatctctgctacccctgagctgctgtgcaggaatggggagagccgtcctccct 392
Query: 240 tcccagactcctgacacttctctgctaccttttaaagtcacatggaccttccttaaggtc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcccagactcctgacacttctctgctaccttttaaagtcacatggaccttccttaaggtc 332
Query: 300 aatgttttttcaatctcagtatcatctgctgtcatttatcctgttgggtacctagcctga 359
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agtgttttt-caatctcagtatcatctgctgtcatttatcctgttgggtacctagcctga 273
Query: 360 tatagaaaccaccagcatggtactcagacatcagtgtttttaaagcatccacatggatcc 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tatagaaaccgccagcatggtactcagacatcagtgtttttaaagcatccacatggatcc 213
Query: 420 tatgttacatgg 431
||||||||||||
Sbjct: 212 tatgttacatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_k13.g1 MSMg01no124_k13.g1 CHROMAT_FILE:
MSMg01no124_k13.g1 PHD_FILE: MSMg01no124_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:03 2005
(493 letters)
>mm_chr7_70458001_70458893
Length = 893
Score = 876 bits (453), Expect = 0.0
Identities = 483/493 (97%)
Strand = Plus / Plus
Query: 1 aggctggtgtggatgctgtatgtctgcaagtcagcagcagctcagagcagcaggactcag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctggtgtggatgctgtgtgtctgcaagtcagcagcagctcagagcagcaggactcag 260
Query: 61 gaggcagagtctgagacctaatcatttttaggatcatgacttctatgctctgcttgactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggcagagtctgagacctaatcatttttaggatcatgacttctatgctctgcttgactt 320
Query: 121 ctagactcctctggtttcctgagtaaagtcatcagcatcacgagcttgactctcatcctc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ctagactcctctggtttcctgagtaaagtcatcagcatcatgagcttgactctcatcctc 380
Query: 181 ctaatctcctggccctaatgtcaccctttatggcggatgctgactgagctatggaatgcc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaatctcctggccctaatgtcatcctttatggcggatgctgactgagctatggaatgcc 440
Query: 241 caggcaactaacaacatattacttcttggtgtggccatgtttatgccttcagaagagatg 300
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 441 caggcaactaacaacatattacttcttggtgtggccatgaagatgtcttcagaagagaag 500
Query: 301 aggatcctaatgatgaactgaataaagcaggatgctttctccagtatgtgtggatgtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggatcctaatgatgaactgaataaagcaggatgctttctccagtatgtgtggatgtctc 560
Query: 361 tcagtccactgagggcctgaatgaaccaaacattggaggggagaacctgttctctctact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagtccactgagggcctgaatgaaccaaacattggaggggagaacctgttctctctact 620
Query: 421 caagatgaacagaaactgtcttctgctttgttgcatggctgtccccagtgtccaggcctt 480
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 621 caagatgaacagaaactgtcttctactttgttgcatggctgtccccagtgtccatgcctt 680
Query: 481 tggactctgaaat 493
|||||||||||||
Sbjct: 681 tggactctgaaat 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
