Query= MSMg01no126_g19.b1 MSMg01no126_g19.b1 CHROMAT_FILE:
MSMg01no126_g19.b1 PHD_FILE: MSMg01no126_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:48 2005
(551 letters)
>mm_chr7_68246126_68247078
Length = 953
Score = 963 bits (498), Expect = 0.0
Identities = 528/538 (98%), Gaps = 2/538 (0%)
Strand = Plus / Minus
Query: 4 gaattcatgttcttttctta-cacatgcctgctgggttgattagcatgtcaaggtctata 62
||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaattcatgctcttttattaccacatgcctgctgggttgattagcatgtcaaggtctata 682
Query: 63 agcatgtcaatcactaataacaagtatcagttaaacatatcaatgtcatcagtcactttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcatgtcaatcactaataacaagtatcagttaaacatatcaatgtcatcagtcactttt 622
Query: 123 ttagattaattatccagtaactttttatttttcttatcctggtcatgcctg-ttttttct 181
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 ttagattaattatccagtaactttttatttttcttatcctggtcatgcctgtttttttct 562
Query: 182 ttctaatttcctgagtgatgggcttagaacgttggcataatctttctaccttttacaaac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 ttctaatttcctgagtgatgggcttagaacgttggcataatctttctacctttgacaaac 502
Query: 242 taagctgctatttttgattatttactttgcatattgcagtttcctggtgattttaagact 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagctgctatttttgattatttactttgcatattgcagtttcctggtgattttaagact 442
Query: 302 agaatgacataaatgatcctttcttcaaggggacaagcttctatttaactaacctaccca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaatgacataaatgatcctttcttcaaggggacaagcttctatttaactaacctaccca 382
Query: 362 tttttccctattaggtacagattgtttaagtataatggtttgtgccacccacaatatatg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttccctattaggtacagattgtttaagtataatggtttgtgccacccacaatatatg 322
Query: 422 tcccaaattccagaatccagttctggagtccagctgctcttcttcaactttctacaacca 481
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tcccaaattccagaatccagttctggagtccagctgctcctcttcaactttctacaacca 262
Query: 482 tcaaactttcctcaattatttactgcctttctggtaccatgagcctgccatgcctgtc 539
|||||||||||||||||||||| || |||||||| |||| ||||||||||||||||||
Sbjct: 261 tcaaactttcctcaattatttaatgtctttctggaaccaggagcctgccatgcctgtc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 953
Length adjustment: 10
Effective length of query: 541
Effective length of database: 943
Effective search space: 510163
Effective search space used: 510163
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_g19.g1 MSMg01no126_g19.g1 CHROMAT_FILE:
MSMg01no126_g19.g1 PHD_FILE: MSMg01no126_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:48 2005
(242 letters)
>mm_chr7_68073051_68073693
Length = 643
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 ttagatgttttag-ataaattaataagtaggtctttctctttctgtctctgtcttcctct 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagatgttttagtataaattaataagtaggtctttctctttctgtctctgtcttcctct 260
Query: 60 ctcatatatacacacaaatatacttttgagtagatgtcattagtgtgacttaagggatgg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcatatatacacacaaatatacttttgagtagatgtcattagtgtgacttaagggatgg 320
Query: 120 gaatggaaaaatatggatggggatgaagttaggattgaaaggatgaaattgctgttttaa 179
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gaatggaaaaatatggatggggatgaagttaggattgaaaggatgtaattgctgttttaa 380
Query: 180 cttttaaaataaaattaataataagaaaattacttctgcttttctatgtctttatacttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttaaaataaaattaataataagaaaattacttctgcttttctatgtctttatacttc 440
Query: 240 cac 242
|||
Sbjct: 441 cac 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 643
Length adjustment: 9
Effective length of query: 233
Effective length of database: 634
Effective search space: 147722
Effective search space used: 147722
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
