Query= MSMg01no128_j11.b1 MSMg01no128_j11.b1 CHROMAT_FILE:
MSMg01no128_j11.b1 PHD_FILE: MSMg01no128_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:44 2005
(336 letters)
>mm_chr7_59871721_59872457
Length = 737
Score = 530 bits (274), Expect = e-155
Identities = 316/332 (95%), Gaps = 5/332 (1%)
Strand = Plus / Plus
Query: 8 gccaccactgaccagcaaaagtcaactaatcttcttgtgtatttctctatgaagactttg 67
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 208 gccaccactgaccagcaaaagtcaactaatcttcttgtgtatttctctataaagactttg 267
Query: 68 ctattttgaatattttggggggactctcagctggccacctttccagtgttgttcgttttg 127
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 268 ctattttgaatattttggggggactctcagctggccacctttacagtgttgttcgttttg 327
Query: 128 acacagggtttctctgagcagcactggtagtactggaactcattatgtagactggaagcc 187
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 328 acacagggtttctctgagcagcactggtagtactgggattcattatgtagactggaagcc 387
Query: 188 ctcaaactcaaagatatgccaacgtctccttctgaagttctgctgtattatcatacacca 247
||||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||||
Sbjct: 388 ctcaaactcaaagatatgccaacgtatacttctgaagttctggtgtattatcatatacca 447
Query: 248 caccttcaactttgttgaaatttatta---ttaaaaaattctccaaatcttcataaataa 304
|||| |||||||||||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 448 caccctcaactttgttgaaattt--taacattaaaaaattctccaagtcttcataaataa 505
Query: 305 actaaccttcctttaaacaaaattatttgtta 336
|| |||||||||||||||||||||||||||||
Sbjct: 506 accaaccttcctttaaacaaaattatttgtta 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 737
Length adjustment: 9
Effective length of query: 327
Effective length of database: 728
Effective search space: 238056
Effective search space used: 238056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_j11.g1 MSMg01no128_j11.g1 CHROMAT_FILE:
MSMg01no128_j11.g1 PHD_FILE: MSMg01no128_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:44 2005
(233 letters)
>mm_chr7_60010298_60010930
Length = 633
Score = 400 bits (207), Expect = e-116
Identities = 225/231 (97%)
Strand = Plus / Minus
Query: 1 ctttggaacattgaatatcttcacttcaatatggaccagaacatgtaggttcctattata 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ctttggaacattgaatatctccacttcaatatggaccagaacatgtaggttcctattata 372
Query: 61 tatacagtgcatctattatttacctgtatatacttagttaaagtaggtattggaggctat 120
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 371 tatatagtgcatctattatttacctgtatatacttagttaaaataggtattggaggctat 312
Query: 121 ctgaggcacaggccaaaggatttaacactgaaaacttttatccaacccatgaaaaagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 311 ctgaggcacaggccaaaggatttaacactgaaaacttttatccaacccatgaaaatgtaa 252
Query: 181 agcgacattgtgctatatactgtgactgtctagatgctagcagcttcctct 231
|| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 251 agtgacattgtgctataaactgtgactgtctagatgctagcagcttcctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
