Query= MSMg01no128_j13.b1 MSMg01no128_j13.b1 CHROMAT_FILE:
MSMg01no128_j13.b1 PHD_FILE: MSMg01no128_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:44 2005
(330 letters)
>mm_chr7_106046909_106047637
Length = 729
Score = 592 bits (306), Expect = e-173
Identities = 324/330 (98%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1 aacataactaccctcaaaaaccggacccaagtgccacttctttctcggaacctcctctga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aacataactaccctcaaaaaccggacccaagtgccacttctttctcggaagctcctctga 260
Query: 61 ccatgcccatctgagcaatctctcagccacatcccgactgcaggacttctgtcacccagc 120
||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 261 ccatgcccatctgagcaatctcttggccacaccccgactgcaggacttctgtcacccagc 320
Query: 121 tttgcactggtgcacatcttggaacctgtatctgctacttagcctgtgaggctctggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgcactggtgcacatcttggaacctgtatctgctacttagcctgtgaggctctggaat 380
Query: 181 aaagagatgcataaagaaggtccctatcattaccaggtttcctgcagccataacacctca 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 aaagagatgcataaagaaggtccctatcattaccaggtttcctgtagccataacacctca 440
Query: 241 gtgtgtgctatgcaccttacagtgagaagggagctagctggacgcttctgcagaagaggc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gtgtgtgctatgcaccttacagtgagaagggagctagctggacgct-ctgcagaagaggc 499
Query: 301 tctatctaatgggcaccgtggaggacgtta 330
||||||||||||||||||||||||||||||
Sbjct: 500 tctatctaatgggcaccgtggaggacgtta 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_j13.g1 MSMg01no128_j13.g1 CHROMAT_FILE:
MSMg01no128_j13.g1 PHD_FILE: MSMg01no128_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:45 2005
(242 letters)
>mm_chr7_106215017_106215658
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%)
Strand = Plus / Minus
Query: 1 acagtgactgtgctaactcacactccttttctcacatccgtgccactgtttattattaat 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 310 acagtgactgtgctaactcacactccttttctcacatccgtgccagtgtttattattaat 251
Query: 61 taaaaagtctgtgttttggtcctagcagagacttagtgtttgcatggcttgttttatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 taaaaagtctgtgttttggtcctagcagagacttagtgtttgcatggcttgttttatgaa 191
Query: 121 tactaacttttcctataacatttatgaggtaggcacaactgtcatttctatgttacagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tactaacttttcctataacatttatgaggtaggcacaactgtcatttctatgttacagac 131
Query: 181 agggaaagcaattgactaagaaggtataggtgacagtcacagacctgggacattaagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agggaaagcaattgactaagaaggtataggtgacagtcacagacctgggacattaagggt 71
Query: 241 tt 242
||
Sbjct: 70 tt 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
