Query= MSMg01no129_l23.b1 MSMg01no129_l23.b1 CHROMAT_FILE:
MSMg01no129_l23.b1 PHD_FILE: MSMg01no129_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:16 2005
(229 letters)
>mm_chr7_77252480_77253108
Length = 629
Score = 362 bits (187), Expect = e-104
Identities = 190/191 (99%)
Strand = Plus / Plus
Query: 1 gcatgaaacataagcaaggcttcctaatgcagaagaaacccagaatcctgaatcaattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatgaaacataagcaaggcttcctaatgcagaagaaacccagaatcctgaatcaattag 260
Query: 61 agatacatacagctctgaaaatcctccatttaacactggaaagaagtatttctaagcctc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 agatacatacagctctgaaaatcctccatttaacactggaaagaagtatttctaagcccc 320
Query: 121 cctaattttgtaggacatgcagattatgacaagttgcataggtacattaaaaaagcatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaattttgtaggacatgcagattatgacaagttgcataggtacattaaaaaagcatat 380
Query: 181 atatatatata 191
|||||||||||
Sbjct: 381 atatatatata 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no129_l23.g1 MSMg01no129_l23.g1 CHROMAT_FILE:
MSMg01no129_l23.g1 PHD_FILE: MSMg01no129_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:16 2005
(291 letters)
>mm_chr7_77337644_77338335
Length = 692
Score = 414 bits (214), Expect = e-120
Identities = 220/222 (99%), Gaps = 1/222 (0%)
Strand = Plus / Minus
Query: 68 tcaagtagaagcaattctaaactctgtaaccaatgggaagggagcagaaaagcagactct 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tcaagtagaagcaattctaaactctgtaaccaatgggaagggagcagaaaagcagactct 430
Query: 128 ttgtcacaatagtttagtcactgagagaaagagaatgaaaaccaacagttgtagcagagg 187
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 429 ttgtcacaatagtttagtcactgagagaaagagaatgaaaaccaacagctgtagcagagg 370
Query: 188 ctgtccttcaggattatctagtttccatgtcattttccttgttgatgtgacacaagacgt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ctgtccttcaggattatctagtttccatgtcattttccttgttgatgtgacacaagacgt 310
Query: 248 atgtagtgttcacggtgagccttt-ccccatgttctaaacac 288
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 309 atgtagtgttcacggtgagcctttcccccatgttctaaacac 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
