Query= MSMg01no130_d07.b1 MSMg01no130_d07.b1 CHROMAT_FILE:
MSMg01no130_d07.b1 PHD_FILE: MSMg01no130_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:53 2005
(368 letters)
>mm_chr7_75269015_75269782
Length = 768
Score = 673 bits (348), Expect = 0.0
Identities = 363/368 (98%)
Strand = Plus / Minus
Query: 1 atcatttatttgaatttatatttgaaagcattttgttcagtactatttttcttattaatt 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 404 atcatttatttgaatttatatttggcagcattttgttcagtactatttttcttattaatt 345
Query: 61 tttaagcatttttctctgggaaaaacttttcttctatgatatcgtatagcaaattatttg 120
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 344 tttaagcatttttctctgggaaaaacttttcttctatgatgttgtatagcaaattatttg 285
Query: 121 cacactgtagcgttatcacatgactaattctggcttatgttatttccagaagatgcttaa 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 284 cacactgtagcgttatcacatgactaagtctggcttatgttatttccagaagatgcttaa 225
Query: 181 ttccatgcccttagaatctgagcatgtatgcacatgtgtgaacccacagggcaactctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ttccatgcccttagaatctgagcatgtatgcacatgtgtgaacccacagggcaactctgg 165
Query: 241 gtgctgttcctccctccaccctatttcagacaggttctcttgctgggctgtagcacacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gtgctgttcctccctccaccctatttcagacaggttctcttgctgggctgtagcacacca 105
Query: 301 atgaagcaaacaagtggctggccacaagccccaggggtctgtctacctctgtttctacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgaagcaaacaagtggctggccacaagccccaggggtctgtctacctctgtttctacat 45
Query: 361 aacggaga 368
||||||||
Sbjct: 44 aacggaga 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no130_d07.g1 MSMg01no130_d07.g1 CHROMAT_FILE:
MSMg01no130_d07.g1 PHD_FILE: MSMg01no130_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:43:54 2005
(326 letters)
>mm_chr7_75116737_75117456
Length = 720
Score = 518 bits (268), Expect = e-151
Identities = 307/322 (95%), Gaps = 6/322 (1%)
Strand = Plus / Plus
Query: 1 gccgattgatgttgctttttcaaagagtagggagcagctcacaggccccttgaaatgcct 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 201 gccgattgatgttgctttttcaaagagtagggggcagctcacaggccccttgaaatgctt 260
Query: 61 gggcagagctgaattccgtttggtagggatcggagaggggtggctcagagcgttcaggag 120
|||||||||| |||||| |||||||||||| |||||||||||| || ||||||||||||
Sbjct: 261 gggcagagctaaattccatttggtagggattggagaggggtggatc--agcgttcaggag 318
Query: 121 cctgtggaaggatatacaccgtgtaagatacagccacaccttgctacttgcttacctcga 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 319 cctgtggaaggatatacaccgtgtaagatacagccacgccttgctacttgcttgcctcga 378
Query: 181 agaggtctctcgtattaaccagttaggaatctgaacagacacacttggtgtgttgctgac 240
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 379 agagg--tctcgtattaaccagttaggaatctgaacagacacacttg--gtgttgctgac 434
Query: 241 agtggaaactaaggaagagatcattgtgtcacccaaattctgatgtccccatggaggatc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 agtggaaaccaaggaagagatcattgtgtcacccaaattctgatgtccccatggaggatc 494
Query: 301 aggcctgactaggcttgaggtc 322
||||||||||||||||||||||
Sbjct: 495 aggcctgactaggcttgaggtc 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 720
Length adjustment: 9
Effective length of query: 317
Effective length of database: 711
Effective search space: 225387
Effective search space used: 225387
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
