Query= MSMg01no131_g07.b1 MSMg01no131_g07.b1 CHROMAT_FILE:
MSMg01no131_g07.b1 PHD_FILE: MSMg01no131_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:36 2005
(270 letters)
>mm_chr7_128663354_128664023
Length = 670
Score = 435 bits (225), Expect = e-126
Identities = 257/271 (94%), Gaps = 7/271 (2%)
Strand = Plus / Minus
Query: 4 ggaattcctcttttct----ttctcctcacacttcctgcatagttgtttttcataggtag 59
|||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 487 ggaattcctc---tctcaacttctcctcagacttcctgcatagttgtttttcataggtag 431
Query: 60 gaagagtaaagctggcgtcgagggagtagtgttgttatttgcttatgcctgctcatatac 119
|||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 430 gaagagcaaagctggagtcgagggagtagtgttgttatttgcttacgcctgctcatatac 371
Query: 120 acgtagccacagttcagtagtatgggttgctcacacttgctgagtgatttgcacatgcct 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 atgtagccacagttcagtagtatgggttgctcacacttgctgagtgatttgcacatgcct 311
Query: 180 ggcaaaagctgtaacttctcagagtcctcatttcctcttcatagctcacaggggtggaaa 239
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 310 ggcaaaagctgtaacttctcagagtcctcatttcctcttcatagctcataggggtggaga 251
Query: 240 cgccattagcctcagtttataagtgagaaac 270
|||||||||||||||||||||||||||||||
Sbjct: 250 cgccattagcctcagtttataagtgagaaac 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_g07.g1 MSMg01no131_g07.g1 CHROMAT_FILE:
MSMg01no131_g07.g1 PHD_FILE: MSMg01no131_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:36 2005
(224 letters)
>mm_chr7_128506288_128506911
Length = 624
Score = 400 bits (207), Expect = e-116
Identities = 219/223 (98%)
Strand = Plus / Plus
Query: 1 gaggtagggacaataatatccacctggcttgctttgtgaatatctgtaatgatcagctga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gaggtagggacaataatatccacctggcttgctttgtggatatctgtaatgatcagctga 260
Query: 61 attactgtccaccatgacttaactgatagacagaaatgctttgacatttccaaagactgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 261 attactgtccaccatgacttaactgatagacagaaatgctttgacatttccacagattgt 320
Query: 121 gaccccataccaaaaatacagagcaaaatatgtgaaactctataaaggatgcttcatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaccccataccaaaaatacagagcaaaatatgtgaaactctataaaggatgcttcatggt 380
Query: 181 tccctacatgattccccactggaaaatggggtgggagcaggag 223
||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tccctacatgagtccccactggaaaatggggtgggagcaggag 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
