Query= MSMg01no132_n23.b1 MSMg01no132_n23.b1 CHROMAT_FILE:
MSMg01no132_n23.b1 PHD_FILE: MSMg01no132_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:31 2005
(517 letters)
>mm_chr7_35680734_35681650
Length = 917
Score = 961 bits (497), Expect = 0.0
Identities = 512/517 (99%)
Strand = Plus / Plus
Query: 1 atataaatgctagggccccaagaggcagggtggggttttggttgctgttggttgcagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atataaatgctagggccccaagaggcagggtggggttttggttgctgttggttgcagttt 260
Query: 61 gttaattaatcctgcacaaagaagaaacgagaaattagatatcctaatggcagagatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaattaatcctgcacaaagaagaaacgagaaattagatatcctaatggcagagatcac 320
Query: 121 acttgccccaaggaagttgatgcctgattacaggaagtaatctaagggtaaaattgaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttgccccaaggaagttgatgcctgattacaggaagtaatctaagggtaaaattgaccc 380
Query: 181 ctttttctactgtcccttttttctctcctagttagtgttagggggttgaaagggtgggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttttctactgtcccttttttctctcctagttagtgttagggggttgaaagggtgggaa 440
Query: 241 aagggtggagaaggtcttaagaaagaacccacaagataggcaatgataagctacagaagt 300
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagggtggagaagggcagaagaaagaacccacaagataggcaatgataagctacagaagt 500
Query: 301 tggctggcgaaggctggtgagcctgagaccttgactgactacaaaatctgcaggacaact 360
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 tggctggtgaaggctggtgagcctgagaccttgactgactacaaaatctggaggacaact 560
Query: 361 atggaagacacctgacatgctcccacatggaagtacatgtgcaccaataggcatgcatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atggaagacacctgacatgctcccacatggaagtacatgtgcaccaataggcatgcatat 620
Query: 421 gagcacctacaggcatgtacatctgcactcacatgcaggtacatgtgcacccacacatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagcacctacaggcatgtacatctgcactcacatgcaggtacatgtgcacccacacatac 680
Query: 481 agaagcactcacccacatgctaattcatgtatatcac 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaagcactcacccacatgctaattcatgtatatcac 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_n23.g1 MSMg01no132_n23.g1 CHROMAT_FILE:
MSMg01no132_n23.g1 PHD_FILE: MSMg01no132_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:31 2005
(292 letters)
>mm_chr7_35829444_35830130
Length = 687
Score = 518 bits (268), Expect = e-151
Identities = 281/288 (97%), Gaps = 5/288 (1%)
Strand = Plus / Minus
Query: 1 ctggagctcaatgaaagcttgtgtagaggactcccctggttctcccaggccagtctaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctggagctcaatgaaagcttgtgtagaggactcccctggttctcccaggccagtctaagg 424
Query: 61 cagaagcagaaggcacagggcctgtgctaacagtgttcctgggaacagactcaaggctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cagaagcagaaggcacagggcctgtgctaacagtgttcctgggaacagactcaaggctga 364
Query: 121 cacttggtgagccatcatcctgggccacagttccatgctctcttctatgaaggagtgaag 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 363 cacttggtgagccatcatcctgggccacagttccatgctgtcttctatgaaggagtgaag 304
Query: 181 aggaagatgggcagaaagagccagttttagaaaagcctttattgcaaattccattctgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aggaagatgggcagaaagagccagttttagaaaagcctttattgcaaattccattctgca 244
Query: 241 tgttgattttttttttttttgaagacaccagtgcatcttccctgagca 288
|||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 243 tgttga-----tttttttttgaagacatcagtgcatcttccctgagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 687
Length adjustment: 9
Effective length of query: 283
Effective length of database: 678
Effective search space: 191874
Effective search space used: 191874
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
