Query= MSMg01no133_j07.b1 MSMg01no133_j07.b1 CHROMAT_FILE:
MSMg01no133_j07.b1 PHD_FILE: MSMg01no133_j07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:25 2005
(628 letters)
>mm_chr7_47958986_47960012
Length = 1027
Score = 1137 bits (588), Expect = 0.0
Identities = 618/628 (98%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 1 gagtctctctgctcagtctggcatcttagagtcaataagagaagaggggcagataagaat 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gagtctctctgctcagtctggcatcttagagtcaataagagaagaagggcagataagaat 260
Query: 61 gaaagaacaaagacccaagaagtagcaagaaggaagaatgaaaggggaaagtactgggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagaacaaagacccaagaagtagcaagaaggaagaatgaaaggggaaagtactgggaa 320
Query: 121 tcatcctagaggggttagtgtccactcagaaagtgaccttctgaagccaaggacctactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatcctagaggggttagtgtccactcagaaagtgaccttctgaagccaaggacctactc 380
Query: 181 accttacctgaaacctgaggaccagaatggtgctcccaggctaaagctcaaaagatcttg 240
||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 381 accttacctgaaacctgaggaccagaatgatgctcccaggctaaagctcaagtgatcttg 440
Query: 241 ggctgtattttctacctattcctgcaagatccctcattgttctttgtcaatcagggtaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctgtattttctacctattcctgcaagatccctcattgttctttgtcaatcagggtaga 500
Query: 301 agggaaattctgttgccttgtccacagctcaagccagttgttctttgctcctgtgtgcct 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 agggaaattctgttgccttgtccaca-ctcaagccagttgttctttgctcctgtgtgcct 559
Query: 361 ggcatgcacacatacatggccagatattgtgtacacctgttacagacccagcaacatcca 420
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 ggcatgcacacatacatggccagatattgtgtacacctgtcccagacccagcaacatcca 619
Query: 421 cggcatctgctgatgagtttctctttacccgatgccccttacttaggagcaagcctcact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cggcatctgctgatgagtttctctttacccgatgccccttacttaggagcaagcctcact 679
Query: 481 tccatgtggatgtgtgtcgttccctgaggagaaaggacacagcccctcccaaatgaggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tccatgtggatgtgtgtcgttccctgaggagaaaggacacagcccctcccaaatgaggaa 739
Query: 541 gagaacaaagccagttcctggaggtgacttgagaggaagttcagaccttgattattcttg 600
||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 740 gagaacaaagccagttcctggaggtgacttgagaggaagttcagaccataattgttcttg 799
Query: 601 tccagtttcttctcctaatggtgctgag 628
||||||||||||||||||||||||||||
Sbjct: 800 tccagtttcttctcctaatggtgctgag 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1027
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1017
Effective search space: 628506
Effective search space used: 628506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_j07.g1 MSMg01no133_j07.g1 CHROMAT_FILE:
MSMg01no133_j07.g1 PHD_FILE: MSMg01no133_j07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:25 2005
(232 letters)
>mm_chr7_48107295_48107926
Length = 632
Score = 422 bits (218), Expect = e-122
Identities = 227/230 (98%)
Strand = Plus / Minus
Query: 1 tacaaaaggagtcctcagttctggccacaaacactgaatgaaaacagtggccttttctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tacaaaaggagtcctcagttctggccacaaacactgaatgaaaacagtggccttttctgc 371
Query: 61 ttgttgaacagaaatcaaaagcttgcatgcatgagtgagcccaagtcacttgggaacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgttgaacagaaatcaaaagcttgcatgcatgagtgagcccaagtcacttgggaacctg 311
Query: 121 tcattagttgatctattcactccatacacatagattacatgttactaatgacagagaggt 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 310 tcattagttgatctattcactccatacacatagattacatgttactgatgacagagacgt 251
Query: 181 taagggcctgtgttgtgtgaaggccagtgcatgactctctgatgtggtct 230
||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 250 taagggcctgtgttgtgggaaggccagtgcatgactctctgatgtggtct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
