Query= MSMg01no135_p21.b1 MSMg01no135_p21.b1 CHROMAT_FILE:
MSMg01no135_p21.b1 PHD_FILE: MSMg01no135_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:14 2005
(403 letters)
>mm_chr7_36910697_36911499
Length = 803
Score = 725 bits (375), Expect = 0.0
Identities = 393/399 (98%)
Strand = Plus / Minus
Query: 5 gaattcagggacagcccgtgctacacggtgagaaccccttccatctcaagaaaaagaaag 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gaattcagggacagcctgtgctacacggtgagaaccccttccatctcaagaaaaagaaag 544
Query: 65 gatggaagcttttgtgaacagggccaccctgggctgtatctacaccctcaaaagactcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 543 gatggaagcttttgtgaacagggccaccctgggctgtatctacaccctcaaaagattcta 484
Query: 125 ggctctaaatcccacacctggcatgtaccctttggctgagcaaaatgttgtgaacaatgc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 483 ggctctaaatcccacacctggcatgtaccctttggctgagcaaaatgttgtgggctatgc 424
Query: 185 gttacacctgccacccacatgtcaccccaaagtgcccagtgtctacacctgtaggtcaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gttacacctgccacccacatgtcaccccaaagtgcccagtgtctacacctgtaggtcaca 364
Query: 245 gccctgggtcatcagaaagacatcatcctggtgcaattctatgtcttcgaggttacaaca 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 363 gccctgggtcatcagaaagacatcatcctggtgcaattctatgtctttgaggttacaaca 304
Query: 305 tcgtcaactggctgatattttcctctgccgtgcagaggcaataaaagcagctggcctgca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tcgtcaactggctgatattttcctctgccgtgcagaggcaataaaagcagctggcctgca 244
Query: 365 ctgtgtatcctgcctgccctgctaatgagagacattcct 403
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ctgtgtatcctgcctgccctgctaatgagagacattcct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_p21.g1 MSMg01no135_p21.g1 CHROMAT_FILE:
MSMg01no135_p21.g1 PHD_FILE: MSMg01no135_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:14 2005
(626 letters)
>mm_chr7_36748690_36749715
Length = 1026
Score = 1013 bits (524), Expect = 0.0
Identities = 593/626 (94%), Gaps = 20/626 (3%)
Strand = Plus / Plus
Query: 1 atttaccccactgcctgctgattcttattctgatgtcagaacagcatttccaggcttcta 60
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 215 atttaccccactgcctgctgattcttactctgatgccagaacagcatttccaggcttcta 274
Query: 61 cgtttgcctaaggaccattggctctccaggaatcttccaggtttctggtgccagggtggg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 275 cgtttgcctaaggaccattggctctccaggaatcttccaggtttttggtgccagggtggg 334
Query: 121 cctgttaaagcacccagccttgtggactgagcaactgggttctcagcttctcctgaaaga 180
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 335 cctgttaaagcacccagccttgtggactgagcaagtgggttctcagcctctcctgaaaga 394
Query: 181 atcagttcttatgggactccatctatcctctaagaccaagcaactcgctggatctcaggc 240
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 395 atcagttcttatgggactccatctatcctctaagaccaagcaactagttggatctcaggc 454
Query: 241 taaggtgtgaattcagttgttatta-cttcaatgtagctgacttaatatctatttaatgt 299
||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||
Sbjct: 455 taaggtgtgaattcagttgttattatct-caatgtagctgaattaatatctatttaatgt 513
Query: 300 atttagtatatattaaataatatttactatatatatgtatacacacacaca--tatatat 357
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 514 atttagtatatattaaataatatttactatatatatgtatacacacacacacatatatat 573
Query: 358 gcgcacatgcgtgcgtgcgcacacacacacacacacacacacacacacacacacacacac 417
|||| | ||| ||| |||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 574 gcgcgc--gcgcgcgcgcgcgcacgcacacacacacacacacacacacacacacacacac 631
Query: 418 acacacacacacacacattcatcccactggttctgttaccctagaaaggtctaactaata 477
||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aca--------------ttcatcccactggttctgttaccctagaaaggtctaactaata 677
Query: 478 caaatgtttaaagataaaaaacatagcagggcaaatttcatacttctttaggaagtatat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 caaatgtttaaagataaaaaacatagcagggcaaatttcatacttctttaggaagtatat 737
Query: 538 taagcaaaaataatagcaaaagaatttaaattcttatttatttgtattttatgtatatat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 taagcaaaaataatagcaaaagaatttaaattcttatttatttgtattttatgtatatat 797
Query: 598 gctttgtttgtttgtttgtatgtatg 623
||||||||||||||||||||||||||
Sbjct: 798 gctttgtttgtttgtttgtatgtatg 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
