Query= MSMg01no136_e14.b1 MSMg01no136_e14.b1 CHROMAT_FILE:
MSMg01no136_e14.b1 PHD_FILE: MSMg01no136_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:37 2005
(607 letters)
>mm_chr7_142833446_142834450
Length = 1005
Score = 1129 bits (584), Expect = 0.0
Identities = 600/606 (99%), Gaps = 2/606 (0%)
Strand = Plus / Plus
Query: 1 ccagatggctgggcaggtttgatgtctgcacactgtatctccctctactggtcccatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccagatggctgggcaggtttgatgtctgcacactgtatctccctctactggtcccatcag 260
Query: 61 gaagttcggctctaagaacttgcagacagacagccacacttaatgaggggaagcagttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagttcggctctaagaacttgcagacagacagccacacttaatgaggggaagcagttga 320
Query: 121 gcttcgtcctccccaagggtgctggcctagcctcctcctagatcattgaatgcttggtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttcgtcctccccaagggtgctggcctagcctcctcctagatcattgaatgcttggtgg 380
Query: 181 ggaaggctattaatgcttgggatgaaacacaatgtttcacccaggaattccgcatctctg 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ggaaggctattaatgcttgggatgaaaca--atgtttcacccaggaattccgcatctctg 438
Query: 241 gttttggattaagccaattaataactcccaatcaattaccctgcagtttcctctagtgta 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gagttggattaagccaattaataactcccaatcaattaccctgcagtttcctctagtgta 498
Query: 301 tgtaaagtaccatggcagtgctcagtaacagattggagagggaaaaggcagtgtgtggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgtaaagtaccatggcagtgctcagtaacagattggagagggaaaaggcagtgtgtggca 558
Query: 361 ttgtgtgtgaagctgcctgtcaaatgagagcctgggcagcacggatcctgctgagggtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttgtgtgtgaagctgcctgtcaaatgagagcctgggcagcacggatcctgctgagggtgt 618
Query: 421 gcgtcgccagcagccctgacctccaacatgggctttctaatcctgcagtctgacttaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gcgtcgccagcagccctgacctccaacatgggctttctaatcctgcagtctgacttaatc 678
Query: 481 tggtctctcatgctccaagaaccagtggtgtcatgccttgaggggttcctatgtacacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tggtctctcatgctccaagaaccagtggtgtcatgccttgaggggttcctatgtacacaa 738
Query: 541 cacccatgcaagtgtcaggctagagcagatgcacactcaaccacggagctattcgtgtct 600
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cacccatgcgagtggcaggctagagcagatgcacactcaaccacggagctattcgtgtct 798
Query: 601 ggtcca 606
||||||
Sbjct: 799 ggtcca 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1005
Length adjustment: 10
Effective length of query: 597
Effective length of database: 995
Effective search space: 594015
Effective search space used: 594015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_e14.g1 MSMg01no136_e14.g1 CHROMAT_FILE:
MSMg01no136_e14.g1 PHD_FILE: MSMg01no136_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:37 2005
(609 letters)
>mm_chr7_142901336_142902344
Length = 1009
Score = 679 bits (351), Expect = 0.0
Identities = 384/395 (97%)
Strand = Plus / Minus
Query: 69 ttaatagttgatgaactctttggttactaatctgtattaaaactaagcactaaaatttaa 128
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 395 ttaatagttgatgaactctttggttattaatctgtattaaaactaagcactaaaatttaa 336
Query: 129 tacaaatagtgtgatagtaattactaggagtttcatgcctctttaatataaccatgcaaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 335 tacaaatagtgtgatagtaattactaggagtttcatgcctctttaatataatcatgcaaa 276
Query: 189 aatttcaggactgggaagatagctctatataaaatgctttttctgtaagcaggtgcccct 248
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 275 aatttcaggactgggaagatagctctatataaaatgctttttctgtaagaaggtgcccct 216
Query: 249 gagtttgatcccctagaagccatggaaacaaatttgggtgtggtataatcacacctataa 308
|||||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 215 gagtttgatcccctgggacccatggaaacaaatttgggtgtggtatgatcacacctataa 156
Query: 309 tccccatcactgagaaggcagagagacaggaggattgctggtgtttggtggccagataat 368
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 155 tccccatcactgagaaggcagagagataggaggattgctggtgtttggtggccagataat 96
Query: 369 ctagccaaattggtgaggttcaggtttagtttgttcccgctccctagaaataagatggta 428
|||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 95 ctagccaaattggtgacgttcaggtttagtttgttctcactccctagaaataagatggta 36
Query: 429 agcatttgagaaatatacttagtatcaattttgtt 463
|||||||||||||||||||||||||||||||||||
Sbjct: 35 agcatttgagaaatatacttagtatcaattttgtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
