Query= MSMg01no136_m01.b1 MSMg01no136_m01.b1 CHROMAT_FILE:
MSMg01no136_m01.b1 PHD_FILE: MSMg01no136_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:14 2005
(494 letters)
>mm_chr7_150605791_150606684
Length = 894
Score = 725 bits (375), Expect = 0.0
Identities = 414/445 (93%), Gaps = 28/445 (6%)
Strand = Plus / Minus
Query: 5 gaattcatcagccacaccagatgggacatgacactaaaaagagcaccctaagactgagat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcatcagccacaccagatgggacatgacactaaaaagagcaccctaagactgagat 358
Query: 65 gtggtaggaacccctactattcacccagccagttactcctcaagagcctcctcacacaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtggtaggaacccctactattcacccagccagttactcctcaagagcctcctcacacaag 298
Query: 125 agaattagtccctgggctttgtctaggatacttagcttactttatatgtactttggaggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 agaattagtccctgggctttgtctaggatacttagcttactttatatgtactttggaggt 238
Query: 185 gctttgtcatgtagacctgcacccaaatagcctacacacacacacacacacacacacaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gctttgtcatgtagacctgcacccaaatagcctacacacacacacacacacacacacaca 178
Query: 245 cacacacacacacacacacacacacacacgcatccccacacaactactcatataaatcca 304
||||||| |||||||| ||||||||||||||||
Sbjct: 177 cacacac----------------------------ccacacaagtactcatataaatcca 146
Query: 305 gcctcttccaacctctgcggacagggcgtggctaggcctgccttctcacctctgacccag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gcctcttccaacctctgcggacagggcgtggctaggcctgccttctcacctctgacccag 86
Query: 365 gtgcctgtgcccctctcctctcctctgctttgctctaggcagcattggctgacctttgtg 424
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gtgcctgtgttcctctcctctcctctgctttgctctaggcagcattggctgacctttgtg 26
Query: 425 cttagttctgtgccttttctcagat 449
|||||||||||||||||||||||||
Sbjct: 25 cttagttctgtgccttttctcagat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_m01.g1 MSMg01no136_m01.g1 CHROMAT_FILE:
MSMg01no136_m01.g1 PHD_FILE: MSMg01no136_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:14 2005
(338 letters)
>mm_chr7_150451332_150452069
Length = 738
Score = 638 bits (330), Expect = 0.0
Identities = 336/338 (99%)
Strand = Plus / Plus
Query: 1 tgcgtttgtcagcgaggctggggccagcctatgccttctggaaggggagcattagtggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcgtttgtcagcgaggctggggccagcctatgccttctggaaggggagcattagtggac 260
Query: 61 tagggggctagctcttctgatgggactgctttgcctgggatattcagggcctggagacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagggggctagctcttctgatgggactgctttgcctgggatattcagggcctggagacaa 320
Query: 121 tcagggcctgctgtggtacctcagtgagcacccatttctcttacttggcttctcaacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagggcctgctgtggtacctcagtgagcacccatttctcttacttggcttctcaacctg 380
Query: 181 caaatgatgatggaagaagatggaggggccatgttgggggcagtgtccaggaggataggg 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatgatgatgggagaagatggaggggccatgttgggggcagtgtccaggaggataggg 440
Query: 241 aaggtgacttgtcaagaacagatgagaccagtttgtctttccagactagtgtcctgtctt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggggacttgtcaagaacagatgagaccagtttgtctttccagactagtgtcctgtctt 500
Query: 301 ctgtgaatatccagaccacctctgtctgcataaggtgc 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgaatatccagaccacctctgtctgcataaggtgc 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
