Query= MSMg01no136_m06.b1 MSMg01no136_m06.b1 CHROMAT_FILE:
MSMg01no136_m06.b1 PHD_FILE: MSMg01no136_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:15 2005
(429 letters)
>mm_chr7_30352987_30353815
Length = 829
Score = 779 bits (403), Expect = 0.0
Identities = 421/427 (98%), Gaps = 1/427 (0%)
Strand = Plus / Plus
Query: 3 ggaattctaatttgtaccctggaaggggaaatggtgagaatgtctcatgtacagacagtg 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctaatttgaagcctggaaggggaaatggtgagaatgtctcatgtacagacagtg 262
Query: 63 tgggcagggtcctgccacgctgctgttttattgttattattttagatttatttcatttaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgggcagggtcctgccacgctgctgttttattgttattattttagatttatttcatttaa 322
Query: 123 tgtatatgagtgttttctggcatttaagtatgtacactatgtgtgtgtcagcatgtaggg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtatatgagtgttttctggcatttaagtatgtacactatgtgtgtgtcagcatgtaggg 382
Query: 183 ggtgtgtaaaagtgattttaaaagatgatttttttttctctatcttggttagctcccaaa 242
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 g-tgtgtaaaagtgattttaaaagatgatttttttttctctatcttggttagctcccaaa 441
Query: 243 tgagtaagatggagactgtaagatttgattagctttacagcacaataactgagcagtcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgagtaagatggagactgtaagatttgattagctttacagcacaataactgagcagtcat 501
Query: 303 tgatctattctaatgtaggctactctggctacctcccagccaaaacctccatatatttgc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgatctattctaatgtaggctactctggctacctcccagccaaaacctccatatatttgc 561
Query: 363 atttttagcaccgatctgcctttcttcaagtgtattctcccattatgtctctctgaaccc 422
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atttttagtattgatctgcctttcttcaagtgtattctcccattatgtctctctgaaccc 621
Query: 423 cttcttc 429
|||||||
Sbjct: 622 cttcttc 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_m06.g1 MSMg01no136_m06.g1 CHROMAT_FILE:
MSMg01no136_m06.g1 PHD_FILE: MSMg01no136_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:15 2005
(177 letters)
>mm_chr7_30552396_30552972
Length = 577
Score = 292 bits (151), Expect = 8e-84
Identities = 160/163 (98%)
Strand = Plus / Minus
Query: 1 aatgtcgatcatactggcttcaaactctggcccatgtctctgccttctgtttgctgtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 363 aatgtcgatcatactggcttcaaactctggcccatgtctctgccttctgtttgctatgat 304
Query: 61 taaaagtatgtatcactgtgcctcaagtcttggtggattttgttattgttggttgatttt 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 taaaagtatgcatcactgtgcctcaagtcttggtggattttgttattgttggttgatttt 244
Query: 121 gttgttgtggaagcagagtcttattaggaagactgtctccggg 163
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 243 gttgttgtggaagcagagttttattaggaagactgtctccggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 577
Length adjustment: 8
Effective length of query: 169
Effective length of database: 569
Effective search space: 96161
Effective search space used: 96161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
