Query= MSMg01no137_n20.b1 MSMg01no137_n20.b1 CHROMAT_FILE:
MSMg01no137_n20.b1 PHD_FILE: MSMg01no137_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:42 2005
(650 letters)
>mm_chr7_26420746_26421795
Length = 1050
Score = 1137 bits (588), Expect = 0.0
Identities = 637/658 (96%), Gaps = 10/658 (1%)
Strand = Plus / Plus
Query: 2 ggaattcactctatataccaggctggcctcgaattcagaggtccgcctgcttctgcctcc 61
|||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggaactcactctgtacaccaggctggcctcgaattcagaggtccgcctgcttctgcctcc 253
Query: 62 tgagtgctgggattaaaggcctgcgccaccactgccctgcttacctgattgtttcttaag 121
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 254 tgagtgctgggattaaaggcctgcgccaccactgccctgcttacatgattgtttcttaag 313
Query: 122 gcagatcccacttggtagccctggctgtcctggaactcactatgtagatcaggctgcctc 181
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcaggtcccacttggtagccctggctgtcctggaactcactatgtagatcaggctgcctc 373
Query: 182 ttcctcccaactgctgggattaaaggtgtacaccaccacacccagcaagcctggattttc 241
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tacctcccaactgctgggattaaaggtgtacaccaccacacccagcaagcctggattttc 433
Query: 242 tatgaatgtaggcaaggctggccttgaatttgtggcaatcctcctgcttctgcttccgca 301
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 434 tatgaatgtaggcaaggctggccttgaatttgtggcaatcctcctgcctctgcttccgca 493
Query: 302 cat--------gccttggccttcatagtcatctgtcagatgtctttggatgggcacaaaa 353
||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 494 catgccaccaagccttggccttcacagtcatctgtcagatgtctttggatgggcacaaaa 553
Query: 354 aaattccaaaagcccttg-taatgctgcataagacaatgctggaggaggaactctggcag 412
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaattccaaaagcccttgcta-tgctgcataagacaatgctggaggaggaactctggcag 612
Query: 413 aggaggggtgtgcttgccttgagacttcccacaaactcaaaaggcccaggcactggggct 472
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aggaggggtgcgcttgccttgagacttcccacaaactcaaaaggcccaggcactggggct 672
Query: 473 tctacatgacagtcaccacaaaggggtaggaagaaggtgctcacacacagtcccaggctg 532
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 673 tctacatgacagtcaccacaaaggggcaggaagaaggtgctcacacacagtcccaggctg 732
Query: 533 gggtggggctccttggtaaagtgcctgcctggtatgtgtgaggccctgggctccatctct 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 gggtggggctccttggtaaagtgcctgcctggtatgtgtgaggccctgggctccatctcc 792
Query: 593 accaccaccaaacataaacaaatctgacagcccagccgtggctatgcacagcacccag 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 accaccaccaaacataaacaaatctgacagcccagccgtggctatgcacagcacccag 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_n20.g1 MSMg01no137_n20.g1 CHROMAT_FILE:
MSMg01no137_n20.g1 PHD_FILE: MSMg01no137_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:42 2005
(643 letters)
>mm_chr7_26489159_26490203
Length = 1045
Score = 1151 bits (595), Expect = 0.0
Identities = 618/631 (97%), Gaps = 11/631 (1%)
Strand = Plus / Minus
Query: 19 tccttagggagtgctggaggcgattgcacagaaagggacaagatgtggtaggggcgtcag 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 tccttagggagtgctggaggcgattgcacagaaagggacaagatgtggtaggggcgtcag 986
Query: 79 ctaagagggaga-------cggcggccaatgacacggagaccaccagtcctctgtcacct 131
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 ctaagagggagacgcaatccggcggccaatgacacggagaccaccagtcctctgtcacct 926
Query: 132 ttaatgggccccccaggtgggcttgagggggggtgcaggtgtccttaaatacagccccgg 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 ttaatgggccccccaggtgggcttgagggggggtgcaggtgtccttaaatacagccccgg 866
Query: 192 gcgctgcgggcggggcgggggcggggccgggcctgccgggaggggcggggcggggcgggg 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gcgctgcgggcggggcgggggcggggccgggcctgccgggaggggcggggcggggcgggg 806
Query: 252 cttcagctgcacttgcaggagcgcacaatcatgttggacaactgctccaccttgggcttg 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cttcagctgcacttgcaggagcgcacaatcatgttggacaactgctccaccttgggcttg 746
Query: 312 cgacccacgtagtagacgatgggcagtggctccaaagcctgcggcacgcagcacggtgac 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cgacccacgtagtagacgatgggcagtggctccaaagcctgcggcacgcagcacggtgac 686
Query: 372 gccgaagcgcccgggttgtgttggttgtagagggcaaggacctgcgggtgggccggggtc 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccgaagcgcccgggttgtgttggttgtagagggcaaggacctgcgggtgggccggggtc 626
Query: 432 actgccagagtccaggggctccccccatctctctccccaccaggatctctacatttctgt 491
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 625 actgccagagtacaggggctccccctatctctctccccaccaggatctctacatttctgt 566
Query: 492 ctcttatctctgagcctcctcaacttccatctctgtttccctatctctcccagtctattt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcttatctctgagcctcctcaacttccatctctgtttccctatctctcccagtctattt 506
Query: 552 ctatat--gtctctccctattgttctctgtccctcatctgtccccatctcggcctctctc 609
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctatatatgtctctccctattgttctctgtccctcatctgtccccatctcggcctctctc 446
Query: 610 tctctctctct--ctctctctctctctctct 638
||||||||||| ||||||||||||||||||
Sbjct: 445 tctctctctcttcctctctctctctctctct 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1045
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1035
Effective search space: 655155
Effective search space used: 655155
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
