Query= MSMg01no138_k18.b1 MSMg01no138_k18.b1 CHROMAT_FILE:
MSMg01no138_k18.b1 PHD_FILE: MSMg01no138_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:46 2005
(473 letters)
>mm_chr7_119686061_119686932
Length = 872
Score = 731 bits (378), Expect = 0.0
Identities = 450/478 (94%), Gaps = 13/478 (2%)
Strand = Plus / Plus
Query: 5 attctccagagtctacactgcaactaggacgattgagtcataaaaaaaaaa--aatacat 62
||||||||||||| | | ||||||||||||||||||||| || ||||||| |||||||
Sbjct: 205 attctccagagtc-agattgcaactaggacgattgagtc--aataaaaaaattaatacat 261
Query: 63 aagaatgaaaaac-gagccatttctttcattaaaggtttctttggtttttggttttggtt 121
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagaatgaaaaacag-gccatttctttcattaaaggtttctttggtttttggttttggtt 320
Query: 122 tgttttggttttccaagacaggatttctctgtgtagccctggctgtcctggaacttactc 181
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtttggttttccaagacaggatttctctgtgtagccctggctgtcctggaacttactc 380
Query: 182 tgtagactaggttgcccttgaattcagaaatctgcctgcttctgcctcccaagtgctggg 241
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtagactaggctggccttgaattcagaaatctgcctgcttctgcctcccaagtgctggg 440
Query: 242 attaaaggcatgcgccaccactgcccagctttcattaatgttgactgctgccactggatt 301
||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 441 attaaaggcgtgtgccaccactgcccggctttcattaaggttgactgctgccactggatt 500
Query: 302 agcgatgaccaacaccctcggagaaaatgacccttgtgagaggatgtgaggtccagcttt 361
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtgatgaccaacaccctcggagaaaatgacccttgtgagaggatgtgaggtccagcttt 560
Query: 362 taggaggaggaacccagggttgacacg-gcgctttctgcactactggacttaggggtagg 420
||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||
Sbjct: 561 taggaggaggaacccagggttaacacaagcgctttctgcactactgggcttaggggtagg 620
Query: 421 agtcttcccccc-----gcccccacccaaagtccatgtggggggtgtgcacttgaaag 473
||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtctccccccccccccgcccccacccaaagtccatgtggggggtgtgcacttgaaag 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 872
Length adjustment: 10
Effective length of query: 463
Effective length of database: 862
Effective search space: 399106
Effective search space used: 399106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_k18.g1 MSMg01no138_k18.g1 CHROMAT_FILE:
MSMg01no138_k18.g1 PHD_FILE: MSMg01no138_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:46 2005
(571 letters)
>mm_chr7_119827742_119828712
Length = 971
Score = 1058 bits (547), Expect = 0.0
Identities = 565/571 (98%)
Strand = Plus / Minus
Query: 1 agttcttaggagccagagcaaatgaagtcatttggtttctgcgggttctctatgcacttc 60
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 771 agttcttcggagccagagcaaatgaagtcatttggtttctgtgggttctctatgcacttc 712
Query: 61 ggcagtaggaaactggccatccaagttggcctttcctcattaactccgttttccttgaaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ggcagtaggaaaccggccatccaagttggcctttcctcattaactccgttttccttgaaa 652
Query: 121 aagacagtaaagtcatagcaaaattctaggatatggggcactgaaatggatgctgtcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aagacagtaaagtcatagcaaaattctaggatatggggcactgaaatggatgctgtcaaa 592
Query: 181 gccatcaggaagtcatggtgtgaagacaaacaggtatcgccttccaaaggcttgggttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gccatcaggaagtcatggtgtgaagacaaacaggtatcgccttccaaaggcttgggttgg 532
Query: 241 catgacagaccgacccagactttggtcaaattatgtatcttctcagagggtttcctgtct 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 catgacagaccgacccggactttggtcaaattatgtatcttctcagagggtttcctgtct 472
Query: 301 ttgcagatgatcataaaatattcatttatctagttgactacctattaggggaaaaaagac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ttgcagatgatcataaaatattcatttatctagttgactacctattaggggaaaaaagac 412
Query: 361 actggttcccaataagaactctgcagctacagtgtcaggtgacattaaagctgccctaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 actggttcccaataagaactctgcagctacagtgtcaggtgacattaaagctgccctaag 352
Query: 421 atgcaggagctcaaggtggttcaaagcaaaaatgcaggcagaaggctctccctcaatcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgcaggagctcaaggtggttcaaagcaaaaatgcaggcagaaggctctccctcaatcct 292
Query: 481 cacagcagagcttcggcagaaagatactggtttcatctgtgacaccagctccatatctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 291 cacagcagagcttcggcagaaagatactggtttcatctgtgacaccagccccatacctaa 232
Query: 541 gtggacaacattcttggatgaacttctcaaa 571
|||||||||||||||||||||||||||||||
Sbjct: 231 gtggacaacattcttggatgaacttctcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
