Query= MSMg01no140_l24.b1 MSMg01no140_l24.b1 CHROMAT_FILE:
MSMg01no140_l24.b1 PHD_FILE: MSMg01no140_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:34 2005
(348 letters)
>mm_chr7_106796605_106797351
Length = 747
Score = 576 bits (298), Expect = e-169
Identities = 325/334 (97%), Gaps = 1/334 (0%)
Strand = Plus / Plus
Query: 13 gtgtgaccttggacaagcccttttccttctattttaaaggtttcctctcatagcatctta 72
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 213 gtgtgaccttggacgagcccttttctttctattttaaaggtttcctctcatagcatctta 272
Query: 73 gcatcaaatgtagcatttcatgttgtctagcccaatgtcttcttcctgtcaatataagac 132
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcatcaaatgtaacatttcatgttgtctagcccaatgtcttcttcctgtcaatataagac 332
Query: 133 cagactcagaaagaaaagacacatggctagccctagctagatttgtgataaagtcagggc 192
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cagacttagaaagaaaagacacatggctagccctagctagatttgtgataaagtcagggc 392
Query: 193 taaacccctaattttcagacctcctttttaggggcacctttatccaatcaccgcattctc 252
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 393 taaacccctaattttcagacctcctgtttaggggcacctttatccaatcaccgcattc-c 451
Query: 253 tttgtctgtatgcagcttctgtatatcttcaggcaagcttcctcttccactttcactgcc 312
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 452 agtgtctgtatgcagcttctgtatatcttcaggcaagcttcctcttccactttgactgcc 511
Query: 313 caagaagaaccctgtgaatctttcaagtgtcctg 346
||||||||||||||||||||||||||||||||||
Sbjct: 512 caagaagaaccctgtgaatctttcaagtgtcctg 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 747
Length adjustment: 9
Effective length of query: 339
Effective length of database: 738
Effective search space: 250182
Effective search space used: 250182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no140_l24.g1 MSMg01no140_l24.g1 CHROMAT_FILE:
MSMg01no140_l24.g1 PHD_FILE: MSMg01no140_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:58:34 2005
(519 letters)
>mm_chr7_106924364_106925282
Length = 919
Score = 980 bits (507), Expect = 0.0
Identities = 516/519 (99%)
Strand = Plus / Minus
Query: 1 cttcgtgacacagatggctggacacactgaaatgaggtgggtcataaattcaaggaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 616 cttcgtgacacagatggctggacacactgaaatgaggtgggtcataaattcgaggaattc 557
Query: 61 aaatgcaccacatccaggatttctccttaacaaagagcagatggcaaagtgggctagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aaatgcaccacatccaggatttctccttaacaaagagcagatggcaaagtgggctagcag 497
Query: 121 gtgtgatatttaaggtctgtaacgagcaaacggataagagtcccccagaaaggtaaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtgtgatatttaaggtctgtaacgagcaaacggataagagtcccccagaaaggtaaaata 437
Query: 181 agaggaaatataaaacaaagaagtaatttccccatatgcaattgcacagagagatttgct 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 436 agaggaaatataaaacaaagaagtaatttcccgatatgcaattgcacagagagatttgct 377
Query: 241 ggctcttgagaataaacatgtctatattcattagtaagcagagagatataaattcaacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ggctcttgagaataaacatgtctatattcattagtaagcagagagatataaattcaacag 317
Query: 301 gtccaatgagctctttagcttggtaagaatggcaaagcttcaccctagggagatgtctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtccaatgagctctttagcttggtaagaatggcaaagcttcaccctagggagatgtctta 257
Query: 361 gtaaagtgcttgttctgagtttggatctccgcgtgcatctaaaaagctgggggtagtgtt 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 256 gtaaagtgcttgttctgagtttggatctccgagtgcatctaaaaagctgggggtagtgtt 197
Query: 421 ggaggccagctctgacaggtaaactgaggcagggcatggtgttcgtggttgatcactcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ggaggccagctctgacaggtaaactgaggcagggcatggtgttcgtggttgatcactcag 137
Query: 481 aagacttttctctgagggaacaaatcttgattctctgag 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 136 aagacttttctctgagggaacaaatcttgattctctgag 98
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
