Query= MSMg01no141_f10.b1 MSMg01no141_f10.b1 CHROMAT_FILE:
MSMg01no141_f10.b1 PHD_FILE: MSMg01no141_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:37 2005
(661 letters)
>mm_chr7_94818935_94819995
Length = 1061
Score = 1201 bits (621), Expect = 0.0
Identities = 636/641 (99%)
Strand = Plus / Minus
Query: 1 ttcttcctgcttttgggttattcccttagacagtcccctcccactttttctacattgatg 60
||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 1018 ttcttcctgcttttgggttattcacttagacagtcccctccaagtttttctacattgatg 959
Query: 61 cagattgcaaaatgtccttcattcttctgtatgactaatatttcattatctagtgagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 cagattgcaaaatgtccttcattcttctgtatgactaatatttcattatctagtgagcta 899
Query: 121 tgacttctgtatgtatgcctacctcaattgacacttaaactgtttaccatgaatactgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 tgacttctgtatgtatgcctacctcaattgacacttaaactgtttaccatgaatactgtt 839
Query: 181 gtaccacattcttttttgtaagacacaaagaaaatgctatatttaaaattattaattatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gtaccacattcttttttgtaagacacaaagaaaatgctatatttaaaattattaattatt 779
Query: 241 tgaattactgatattcttttcatttgatagacatgacaaagaaccactaaataaaatcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tgaattactgatattcttttcatttgatagacatgacaaagaaccactaaataaaatcaa 719
Query: 301 gtgtccaacatcccaccaaaaattgtgttgctgtatttctttaaaaacttattgttttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gtgtccaacatcccaccaaaaattgtgttgctgtatttctttaaaaacttattgttttct 659
Query: 361 aggactttgttaactgcagacatatatggttggttatattgagtgcatctcagagaacca 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 658 aggactttgttaactgcagacatatatggttggttatactgagtgcatctcagagaacca 599
Query: 421 aggaagtttatattaaaatggtgtctcagaaatacaagtttacatattttgggcttagtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aggaagtttatattaaaatggtgtctcagaaatacaagtttacatattttgggcttagtt 539
Query: 481 ttgtgttaatgcatagcaataacaattaaacagcttaattgaaggaataaaagcatgcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttgtgttaatgcatagcaataacaattaaacagcttaattgaaggaataaaagcatgcat 479
Query: 541 ttgcacactgtggcaggtttgtattaatagaaatcatgagagagacagagagagacagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 478 ttgcacactgtggcaggtttgtattaatagaaatcatgagagagacagagagagagagag 419
Query: 601 agagagagagagagagagagagagagagagagagagagaga 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agagagagagagagagagagagagagagagagagagagaga 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_f10.g1 MSMg01no141_f10.g1 CHROMAT_FILE:
MSMg01no141_f10.g1 PHD_FILE: MSMg01no141_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:37 2005
(517 letters)
>mm_chr7_94711357_94712272
Length = 916
Score = 814 bits (421), Expect = 0.0
Identities = 493/519 (94%), Gaps = 8/519 (1%)
Strand = Plus / Plus
Query: 1 gatggggctcacctcatttttctatttttgatcttctttaatcccagtactcccctctca 60
||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 201 gatggggctcaccccatttttctatttttgatgttctttaatcccagtactttcctatca 260
Query: 61 aacaattagagtacaacacagaaacctgtttcgtgaaatgaacatttctgactgtcttta 120
|||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 261 aacaatcagagtacaacacagaaacctgtttcatgaaatgaacatttctgagtgtcttta 320
Query: 121 catacccaagccttaatgctcttcacatatgaattttcttcagactttgaaaatttaagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 tatacccaagccttaatgctcttcacatatgaattttcttcagactttgaagatttaagt 380
Query: 181 gcaaaagttgaactagttaaaaacatgaattgcagtaatttctcatgagaatt-aaacat 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||
Sbjct: 381 gcaaaagttgaactagttaaaaacatgaattacagtaatttctcatgagaatttaaa-at 439
Query: 240 ctctaaaaagctcacaggaaggaccactttagcatttctttcgtaacacattagcttctt 299
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 ctctaaaaagctcacaggaaggaccactttagcatttctttggtaacacattagcttctt 499
Query: 300 tggtatgttgaagatagcctgaaaacttcaagactaattcataagaatacctctctttgg 359
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 500 tgatatgttgaagatagcctgaaaacttcaagactaattcataggaatacctctctttgg 559
Query: 360 gtatattcaagtggcaaaaatgagacatcctaaatggtgcctatataattatactccttg 419
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtatattcaagtggcaagaatgagacatcctaaatggtgcctatataattatactccttg 619
Query: 420 ggaatt-gtgttaaccatgtaacaatactgaaaaattaatgaatagctcaaagacaagaa 478
| |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 620 g-aatttgtgttaaccatataacaatactgaaaaattaatgaataactcaaagacaagaa 678
Query: 479 aagggtttgttgatgttgttgttgttgtgtgtttatttt 517
||||||||||||||||| |||||| |||||||||||
Sbjct: 679 aagggtttgttgatgtt----ttgttgcgtgtttatttt 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 916
Length adjustment: 10
Effective length of query: 507
Effective length of database: 906
Effective search space: 459342
Effective search space used: 459342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
