Query= MSMg01no143_e11.b1 MSMg01no143_e11.b1 CHROMAT_FILE:
MSMg01no143_e11.b1 PHD_FILE: MSMg01no143_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:48 2005
(220 letters)
>mm_chr7_145263607_145264227
Length = 621
Score = 397 bits (205), Expect = e-115
Identities = 217/221 (98%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 1 tctgaggcccactctggcctgtggcaattcgtgaaagagagtgttccctgtgcattccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaggcccactctggcctgtggcaattcgtgaaagagagtgttccctgtgcattccaa 260
Query: 61 tgaggctccaagctctgcgccttttatttcaggacacaggtgccccaggggcttcttgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggctccaagctctgcgccttttatttcaggacacaggtgccccaggggcttcttgtg 320
Query: 121 aaggccaccaatttgcctttcta-tcagacccttttgggtcagcctgcacctccatcaat 179
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtccaccaatttgcctttctaatcagacccttttgggtcagcctgcacctccatcaat 380
Query: 180 cagacacagagcccaggtatttccccttggctcacctgggt 220
||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 381 cagacacagagcccagggatttccccttggttcacctgggt 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 621
Length adjustment: 9
Effective length of query: 211
Effective length of database: 612
Effective search space: 129132
Effective search space used: 129132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no143_e11.g1 MSMg01no143_e11.g1 CHROMAT_FILE:
MSMg01no143_e11.g1 PHD_FILE: MSMg01no143_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:48 2005
(340 letters)
>mm_chr7_145388832_145389573
Length = 742
Score = 601 bits (311), Expect = e-176
Identities = 335/343 (97%), Gaps = 4/343 (1%)
Strand = Plus / Minus
Query: 1 ccttaagg-atcttgaacc-tgcatgaggtttggagcaaaaagagtatcctggaactgga 58
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ccttaaggtatcttgaaccatgcatgaggtttggagcaaaaagagtatcctggaactgga 483
Query: 59 ggagacatgat-gtctgctagtccctggcccgttccttttctttgacatacttggttcta 117
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 482 ggagacatgatggtctgctagtccctggcccattccttttctttgacatacttggttcta 423
Query: 118 ttttgaaggtagcatcagttagggcaacctggagcaaagtctatccatcaggtctgggag 177
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 422 ttttgaaggtagcatcagttagggcaacct-gagcaaagtctatccatcaggtctgggag 364
Query: 178 tttagaatatgtcactactaagccatgatttgctttgacaatgataacctagtaggtcct 237
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 363 tttagaatatgtcactactaagccatgttttgctttgacaatgataacctagtaggtcct 304
Query: 238 ctgcatacagctctaggtttaaagtgtcattccagaacttctatagaagatttgtgacat 297
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctgtagacagctctaggtttaaagtgtcattccagaacttctatagaagatttgtgacat 244
Query: 298 cggctgccatttcagcactcacttgtgggagtcaccacagcct 340
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cggctgccatttcagcactcacttgtgggagtcaccacagcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 742
Length adjustment: 9
Effective length of query: 331
Effective length of database: 733
Effective search space: 242623
Effective search space used: 242623
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
