Query= MSMg01no144_l14.b1 MSMg01no144_l14.b1 CHROMAT_FILE:
MSMg01no144_l14.b1 PHD_FILE: MSMg01no144_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:37 2005
(560 letters)
>mm_chr7_107134442_107135399
Length = 958
Score = 986 bits (510), Expect = 0.0
Identities = 547/560 (97%), Gaps = 2/560 (0%)
Strand = Plus / Plus
Query: 1 gggatgatgacacagggcagcttcaggtacaaggattgatgcatcctagatgttatgaaa 60
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 201 gggatgatgacacagggcagcttcaggtacaaggcttgatgcatccta--tgttatgaaa 258
Query: 61 tcaatttcatggaataacatccaatagttaataccgttaccattcagtgaatttcaaaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 259 tcaatttcatggaataacatccaatagttaataccgttaccattcagtgagtttcaaaat 318
Query: 121 acaacacattaaaaaaaatctattaagaagaaagcacaagaggaacacccctccattgca 180
||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 319 acaacacataaaaaaaaatctattacgaagaaagcacaagaggaacactcctccattgca 378
Query: 181 agctggtacaaccactctggaaatcagtcttgcggttcctcagaaaactggaaatagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agctggtacaaccactctggaaatcagtcttgcggttcctcagaaaactggaaatagtac 438
Query: 241 taactgaggacccagctattccactcctgggcatatacccagaagatgctccaacacata 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 439 taactgaggacccagctattccactcctgggcatttacccagaagatgctccagcacata 498
Query: 301 acaaggacacatgttcctctatattcatagcagtcttatttataatacccagaagctgga 360
||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||
Sbjct: 499 acaaggacacatgttcctctatattcatagcagccttatttatagtagccagaagctgga 558
Query: 361 aacacccagatgtccctcagcaaaggaatggatacagaaaatgtgatacatttacataat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aacacccagatgtccctcagcaaaggaatggatacagaaaatgtgatacatttacataat 618
Query: 421 ggagtactactcagctattaaaaacaatgacttcatgaaattcactggcaaatggatgga 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 619 ggagtactactcagctattaaaaacaatgacttcgtgaaattcactggcaaatggatgga 678
Query: 481 actagaaaataccatcctgagtgaggtaaaatcatcccactcacaaaagaacacacacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 actagaaaataccatcctgagtgaggtaaaatcatcccactcacaaaagaacacacacag 738
Query: 541 tatgcactcactgataagtg 560
||||||||||||||||||||
Sbjct: 739 tatgcactcactgataagtg 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 958
Length adjustment: 10
Effective length of query: 550
Effective length of database: 948
Effective search space: 521400
Effective search space used: 521400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no144_l14.g1 MSMg01no144_l14.g1 CHROMAT_FILE:
MSMg01no144_l14.g1 PHD_FILE: MSMg01no144_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:05:37 2005
(222 letters)
>mm_chr7_107247004_107247625
Length = 622
Score = 414 bits (214), Expect = e-120
Identities = 220/222 (99%)
Strand = Plus / Minus
Query: 1 ttccttaatagaaagagccaatagctgcattatttttatacttctcatatcaagtattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttccttaatagaaagagccaatagctgcattatttttatacttctcatatcaagtattca 363
Query: 61 tcccctggggggtatgtggcagaataccaggaagaatgtaggaaccacagggcacttacc 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 362 tcccctggggggtatgtggcagaataccaggaagaatgtaggaaccatagggcacttacc 303
Query: 121 acactgttgcctatccaagcaaaattcatgtgagttctgctttgccatggtgatcagtca 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 302 acactgttgcctatccaagcaaaattcatgtgagttctgctctgccatggtgatcagtca 243
Query: 181 gtacatgaggaggactggggtgatggggttttatttgctgtg 222
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtacatgaggaggactggggtgatggggttttatttgctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
