Query= MSMg01no145_f11.b1 MSMg01no145_f11.b1 CHROMAT_FILE:
MSMg01no145_f11.b1 PHD_FILE: MSMg01no145_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:24 2005
(520 letters)
>mm_chr7_36602815_36603734
Length = 920
Score = 913 bits (472), Expect = 0.0
Identities = 505/516 (97%)
Strand = Plus / Plus
Query: 5 gaattcttgtagtctacaccctcggcagatagtttaccaagtggggtttgactttccaca 64
|||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattcttgtagtctagacccttggcagatagtttacgaagtggggtttgactttccaca 264
Query: 65 gctttggattggaaagccacatccaactctctcttgaaagactctaaaccattatctacc 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctttggattggaaagccacattcaactctctcttgaaagactctaaaccattatctacc 324
Query: 125 tcactaacttcaatacaagtacagtcttggtgctttgtctgtaaagaagaaattaccaag 184
||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 325 tcactgacttcaatacaagtacaattttggtgctttgtctgtaaagaagaaattaccaag 384
Query: 185 tgatctcctcacttggtacatatttatgtgtctctctgtgaatgccacatgagtgcagtg 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 385 tgatctcctcacttggtacatatttatgtgtctctctgtgtatgccacatgagtgcagtg 444
Query: 245 cctgaggaggccagaggagggcatcagatcccctgtttgcagagttacaggtggtggcaa 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 cctgaggaggccagaggagggcatcagatcccctgtttccagagttacaggtggtggcaa 504
Query: 305 tccaccaggcatgcatgaatgctgggaagaagcagttcatgttcttaaccactggactat 364
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 tccaccaggcatgcatgaatgctgggaagaagcagttcatgttcttaactactggactat 564
Query: 365 ctctttagctctcctcccaaaggtacgcttttatatgtatatttaaaatattttattttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctctttagctctcctcccaaaggtacgcttttatatgtatatttaaaatattttattttt 624
Query: 425 ataggatttcttcattttattttatctgagtggacatttgcatgtatgtgcacatagtct 484
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 625 ataggatttcttcattttattttatgtgagtggacatttgcatgtatgtgcacatagtct 684
Query: 485 tgaactcatgatccttctgcctcacgtcctcctgag 520
||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgaactcatgatccttctgcctcacgtcctcctgag 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_f11.g1 MSMg01no145_f11.g1 CHROMAT_FILE:
MSMg01no145_f11.g1 PHD_FILE: MSMg01no145_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:24 2005
(531 letters)
>mm_chr7_36694618_36695549
Length = 932
Score = 948 bits (490), Expect = 0.0
Identities = 523/538 (97%), Gaps = 7/538 (1%)
Strand = Plus / Minus
Query: 1 agtatctgcagctggcaaagaacatggttttcctacagtacaaaacaatcacagctagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 agtatctgcagctggcaaagaacatggttttcctacagtacaaaacaatcacagctagct 645
Query: 61 gctgcggacagtctggagcagccccgcatcccacacctgggatgaacgcaaaaacacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 644 gctgcggacagtctggagcagccccgcatcccacacctgggatgaacgcaaaaacacgtc 585
Query: 121 cccataacacaaactggggttttaaaggagccaaaactctcaccacagggagtgttatac 180
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cccataacacaaactagagttttaaaggagccaaaactctcaccacagggagtgttatac 525
Query: 181 ttcaatgtaaagacatacggaagtatctgtgactcccatgcagttaccttgagcacatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttcaatgtaaagacatacggaagtatctgtgactcccatgcagttaccttgagcacatga 465
Query: 241 ggagacacagaataagcacagaggccaagagtacaatggtgggcacctactcggagaatt 300
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 464 ggagacacagaaaaagcacagaggccaagagtacaatggtgggcacccactcggagaatt 405
Query: 301 caccataaaaccaaataaaccccaaatcaaaacaaag-------gggggggcaaagatta 353
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 404 caccataaaaccgaataaaccccaaatcaaaacaaagtgggggggggggggcaaagatta 345
Query: 354 aaatctctggcacatcagctgctggcagtgggtggaactggtctgactcaggcacagaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaatctctggcacatcagctgctggcagtgggtggaactggtctgactcaggcacagaaa 285
Query: 414 gaatgcaaaggatatgaggacaggcaagaaactttgaatattgactagatacttaaatat 473
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 284 gaatgcaaaggatatgaggacaggcaagacactttgaatattgactagatacttaaatat 225
Query: 474 tagggaaacttggcttacctcaaagagagccaaagccatgatgtgtatgctttttctc 531
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 224 tagggaaacttggcttacctcaaagagagccaaagccatgatgtgtacgctttttctc 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 932
Length adjustment: 10
Effective length of query: 521
Effective length of database: 922
Effective search space: 480362
Effective search space used: 480362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
