Query= MSMg01no145_o11.b1 MSMg01no145_o11.b1 CHROMAT_FILE:
MSMg01no145_o11.b1 PHD_FILE: MSMg01no145_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:07 2005
(671 letters)
>mm_chr7_94583195_94584265
Length = 1071
Score = 1203 bits (622), Expect = 0.0
Identities = 655/666 (98%)
Strand = Plus / Minus
Query: 6 gaattccacctctgacctcaaagcagctaagaaaagtctggctctgaggcagccaggaca 65
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 gaattccacctctgatttcaaagcagctaagaaaagtctggctctgaggcagccaggaca 989
Query: 66 agattcttaaagcctaccctcacagtgacacacttcttccaaggccataccttctccaaa 125
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 988 agattcttaaagcctaccctcacagtgacacacttcttccaaggccacaccttctccaaa 929
Query: 126 aaggccacacttcctgataattccactccctgtgctttgcatgttcagaccactacaaaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 aaggccacacttcctgataattccactccctgtgctttgcatgttcagaccactacaaaa 869
Query: 186 tccaaaagactgtgcaaggaaatacaaagactgaacagcaaaattttacaaagattcaga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 tccaaaagactgtgcaaggaaatacaaagactgaacagcaaaattttacaaagattcaga 809
Query: 246 tagggaagcactgatttgtatataattcatctttgacaatgtttgaagagttagtaggcc 305
|||| ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct: 808 taggaaagcactgatttgtatacaattcatcttttacaatgtttgacgagttagtaggcc 749
Query: 306 gcagatagaaaagggcagaaaatattttaacctgaaagaataagactaaaaagcaaaatg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gcagatagaaaagggcagaaaatattttaacctgaaagaataagactaaaaagcaaaatg 689
Query: 366 acctctgtgcccatgaaatattgaattcttctattggttattatcaacaaagaaagtaat 425
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 acctctgtgtttatgaaatattgaattcttctattggttattatcaacaaagaaagtaat 629
Query: 426 actgaaaagattaagatgttttgtaaaagttatcacaaattatatgctttttattactgc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 actgaaaagattaagatgttttgtaaaagttatcacaaattatatgctttttattactgc 569
Query: 486 agcattgtctaggtatgatccatggatcactttattcctcattacatttttaggacaaaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agcattgtctaggtatgatccatggatcactttattcctcattacatttttaggacaaaa 509
Query: 546 ctcatagaaattggcaaataagttatatactgaatgaagaaaaaggagattataggactc 605
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 508 ctcatagaaattggcaaataagttatatactgaatgaagaaaacggagattataggactc 449
Query: 606 ttttgaagctttttaacctgtggtgcaaattcattatagtaaaattcaatgatatattta 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttttgaagctttttaacctgtggtgcaaattcattatagtaaaattcaatgatatattta 389
Query: 666 acaata 671
||||||
Sbjct: 388 acaata 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_o11.g1 MSMg01no145_o11.g1 CHROMAT_FILE:
MSMg01no145_o11.g1 PHD_FILE: MSMg01no145_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:08 2005
(626 letters)
>mm_chr7_94404958_94405982
Length = 1025
Score = 1141 bits (590), Expect = 0.0
Identities = 617/626 (98%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 tcagggtctatttttgttttgaattcagcagaggccagtaatagtactagtggttgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagggtctatttttgttttgaattcagcagaggccagtaatagtactagtggttgtgaa 260
Query: 61 tatagtagacatttactccaaagatgctttcctttgagaattagtcagcctgggaaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatagtagacatttactccaaagatgctttcctttgagaattagtcagcctgggaaaatg 320
Query: 121 tgagggaggctagtagtcttgtgatatgtcacaaagaccaaatgagttgctatggtctgt 180
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tgagggaggctagtagtcctgtgatatgtcacaaagaccaaaagagttgctatggtctgt 380
Query: 181 taatgtcatctgatggatatacttagcactttctttgtgcagtcagagcaaagctgaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatgtcatctgatggatatacttagcactttctttgtgcagtcagagcaaagctgaatg 440
Query: 241 tggaaagccaatcttctaacttatggtctgtgttccttcatgttcatcatgctaagcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaaagccaatcttctaacttatggtctgtgttccttcatgttcatcatgctaagcatt 500
Query: 301 gtgtttgtcatataaataatttttaaaactgcagaaccaaatccgccagaggaaataaca 360
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 501 gtgtttgtcatataaataatttttaaaactgcagaaccaaatctgg-agaggaaataaca 559
Query: 361 ttgtaatttcttattaaagagaccgaaggttttcggatttctttgcagatgagattgaat 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 560 ttgtaatttcttattaaagagaccgaaggttttaggatttctttgcagatgagattgaat 619
Query: 421 catggcccaaacattgcattgcctttaggacttggataaactaatatactctgaaatgag 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 620 catggcccaaacattgcattgcctttaggatttggataaactaatatactctgaaatgag 679
Query: 481 atttaagttctgaagattcaatgaaaaaaggcaggtggaatgcttagtatctcgtacata 540
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 680 atttaagttctgaagattcaatgaaaaaaagcaggtggaatgcttagtatctggtacata 739
Query: 541 agttcttagaaaatatagaaaatactgtttttattggatttcctctgtttctgttgttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agttcttagaaaatatagaaaatactgtttttattggatttcctctgtttctgttgttct 799
Query: 601 gtctcccttttcatttatgattttat 626
||||||||||||||||||||||||||
Sbjct: 800 gtctcccttttcatttatgattttat 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
