Query= MSMg01no146_h07.b1 MSMg01no146_h07.b1 CHROMAT_FILE:
MSMg01no146_h07.b1 PHD_FILE: MSMg01no146_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:15 2005
(709 letters)
>mm_chr7_89688270_89689379
Length = 1110
Score = 1236 bits (639), Expect = 0.0
Identities = 693/711 (97%), Gaps = 3/711 (0%)
Strand = Plus / Minus
Query: 1 gcatatctggcttatcaaggtcacacccttacctatggaccacatatccaccccttagga 60
||||||||||||||||||||||||||||||| | |||||||||||||| | |||||||||
Sbjct: 910 gcatatctggcttatcaaggtcacacccttagcaatggaccacatatctatcccttagga 851
Query: 61 tggagtctgaatacctcccaaacatgttgcagtgcagggggtaaagccagcgtattccca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 850 tggagtctgaatacctcccaaacatgttgcagtgcagggggtaaagccagcgtactccca 791
Query: 121 gtcgtaagtcatctcactgtccttctcttggagacggccacccagttctcgagacacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gtcgtaagtcatctcactgtccttctcttggagacggccacccagttctcgagacacagg 731
Query: 181 gctctggtcacaggcttgacggaggcagggtcggtcagtgggtggcttggggccttcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 730 gctctggtcacaggcttgacggaggcagggtcggtcagtgggtggcttggggccttcaca 671
Query: 241 ctcctcctcagggagctcagcctccgtctgtgtgaacgtgaggagcacccgacaccgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ctcctcctcagggagctcagcctccgtctgtgtgaacgtgaggagcacccgacaccgcac 611
Query: 301 ctcacgaacctgaatgccatgtccgcacgtggtgctgcaggctgaccagggctctgggat 360
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctcacgaacctgaatgccaggcccgcacgtggtgctgcaggctgaccagggctctgggat 551
Query: 361 gaacctgagggataccggaagccaaaaaaaggggtcacatgttggctgtaagaggaattc 420
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 550 gaacctgagggataccggaagccaaaaaaaggggtcacatgtgggccgtaagaggaattc 491
Query: 421 tatggttctgagaactgttatttatgtagttaccatgttttgagatcttacaaccaacaa 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tatggttctgagaactgttttttatgtagttaccatgttttgagatcttacaaccaacaa 431
Query: 481 agagactttttcattaaagacaggcttcttttgcctctacacaaaaagtttcatgctaag 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 430 agagactttttcattaaagacaggcttcttttgcctctacacaaaaagttccatgctaag 371
Query: 541 accagtgtgacacattccagaatttcttaagatacaataattaa-caatcatttaaagat 599
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 370 accagtgtgacacattccagaatttcttaagatacaataaataaacaatcatttaaagat 311
Query: 600 aactatgtgatttttatttaccagatggatatttttgccaatctttattttgccaatctt 659
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 310 aactatgtgatttttatttaccagatggatatttttgccaatctttattcagccaatctt 251
Query: 660 ggtgggctttttgtttgtaactggg-agagtgttgaacattctctagcttt 709
|||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 250 ggtgggctttttgtttgtaa-tggggagagtgttgaacattctctagcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1110
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1100
Effective search space: 768900
Effective search space used: 768900
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no146_h07.g1 MSMg01no146_h07.g1 CHROMAT_FILE:
MSMg01no146_h07.g1 PHD_FILE: MSMg01no146_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:08:15 2005
(763 letters)
>mm_chr7_89608914_89610076
Length = 1163
Score = 1398 bits (723), Expect = 0.0
Identities = 753/763 (98%)
Strand = Plus / Plus
Query: 1 caatcctcctgcaataatttaacacctacccttttcccaccatgaccccattggcttttc 60
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 201 caatcctcctgcaataatttaacacctacacttttcccaccatgatttcattggcttttc 260
Query: 61 aaactttttggtgttgaacctaattatgcatacatagccttgtagcttttgccatttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactttttggtgttgaacctaattatgcatacatagccttgtagcttttgccatttttg 320
Query: 121 attacactgaaagcagaaaaagaaatagaagctttgttgaatttgtattcatttctttgt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 attacactgaaagcagaaaaagaaatagaagctttgttgagtttgtattcatttctttgt 380
Query: 181 ttttcttgaaaaacaaaaagttagagatctggactttaacatgaaacttccagctcttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttcttgaaaaacaaaaagttagagatctggactttaacatgaaacttccagctcttaa 440
Query: 241 aaattcttctgccaccaaagtggcttttgaatatctgtattatactcccatgtgatataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattcttctgccaccaaagtggcttttgaatatctgtattatactcccatgtgatataa 500
Query: 301 gctaggttttcctgcataaaccaacaaccctcccaggccagtggcttaaagtaacataat 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctaggttttcctgcagaaaccaacaaccctcccaggccagtggcttaaagtaacataat 560
Query: 361 gctgccgtctgctattgtcacgtgccaatgtatgtcatcaggatttctgttcttggaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctgccgtctgctattgtcacgtgccaatgtatgtcatcaggatttctgttcttggaatg 620
Query: 421 ttgtagggacctaggctgagaggggctttatcgtaacgtatacttgttcgcttaaccaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtagggacctaggctgagaggggctttatcgtaacgtatacttgttcgcttaaccaca 680
Query: 481 gtagatagagagaccatgaaactctcctgttgacacttaagccttcttaacagaactgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtagatagagagaccatgaaactctcctgttgacacttaagccttcttaacagaactgac 740
Query: 541 acaggtcagttgggctcatatttccctggtcaaagacagtgacaatgggtcacttctaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acaggtcagttgggctcatatttccctggtcaaagacagtgacaatgggtcacttctaat 800
Query: 601 gaaactgaggaactgaagtccttgtgtggactgaaaggattgaagtgctttacagtgtct 660
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 801 gaaactgaggaactgaagtccttgtgtggactgagaggattgaagtgctttagagtgtct 860
Query: 661 gtctccaaagaccagcacaacctgcctgcttttcttcagctttttataatcttaaaaaaa 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gtctccaaagaccagcacaacttgcctgcttttcttcagctttttataatcttaaaaaaa 920
Query: 721 ttcatacattttttatcataattcccctcccttgcccttccca 763
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 921 ttcatacattttttatcatatttcccctcccttgcccttccca 963
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 763
Length of database: 1163
Length adjustment: 10
Effective length of query: 753
Effective length of database: 1153
Effective search space: 868209
Effective search space used: 868209
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|