Query= MSMg01no148_e19.b1 MSMg01no148_e19.b1 CHROMAT_FILE:
MSMg01no148_e19.b1 PHD_FILE: MSMg01no148_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:09 2005
(649 letters)
>mm_chr7_90716307_90717355
Length = 1049
Score = 513 bits (265), Expect = e-149
Identities = 301/315 (95%), Gaps = 7/315 (2%)
Strand = Plus / Minus
Query: 4 ggaattcccactttctcccctcaccgtgtatttgttctctaaagttgaacgacacccctg 63
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 316 ggaattcccactttcacccctcaccgtgtatttgttctctaaagttgaacggcacccctg 257
Query: 64 tatctgccgttccacactccctgacctatgttctctttccctacctctaaagctgctgcg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tatctgccgttccacactccctgacctatgttctctttccctacctctaaagctgctgcg 197
Query: 124 tccacct----cggccggcaaggaagacacaacacggtcggattcttctcaacagccttt 179
||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 196 tccacctcggccggccggcaaggaagacacaacatggtcggattcttctcaacagccttt 137
Query: 180 attgcaggaccgtctcaatgctgctatggggaccccgggaacccagggaggtttgcttat 239
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 attgcaggaacgtctcaatgctgctatggggaccccgggaacccagggaggtttgcttaa 77
Query: 240 atactctcagccccccatccactcacagcaggccacgccacctcacca-gacacgcagct 298
|||||||||||||||| ||||||||| ||||||||||||||||||||| | ||| |||||
Sbjct: 76 atactctcagcccccc-tccactcacggcaggccacgccacctcaccatg-cacacagct 19
Query: 299 tcagccaatcagggc 313
|||||||||||||||
Sbjct: 18 tcagccaatcagggc 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_e19.g1 MSMg01no148_e19.g1 CHROMAT_FILE:
MSMg01no148_e19.g1 PHD_FILE: MSMg01no148_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:09 2005
(631 letters)
>mm_chr7_90597330_90598360
Length = 1031
Score = 1166 bits (603), Expect = 0.0
Identities = 624/631 (98%)
Strand = Plus / Plus
Query: 1 agacagtttgtggatatatgcaggtgtcaaaaaccatacaattggacactcaagatcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacagtttgtggatatatgcaggtgtcaaaaaccatacaattggacactcaagatcaag 260
Query: 61 gtatttccttgtctattaatatcattcccatttaaaaaagcagggatgttccatcactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatttccttgtctattaatatcattcccatttaaaaaagcagggatgttccatcactga 320
Query: 121 tagttataatagatgccaaaaaataggaatggatgaaaaatctttatagtagagaacata 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tagttatagtagatgccaaaaaataggaatggatgaaaaatctttatagtagagaacaca 380
Query: 181 ggaaatttaaaatataatcactaaattgacttacattcgtgtaggcattgattcttgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaatttaaaatataatcactaaattgacttacattcgtgtaggcattgattcttgcac 440
Query: 241 agagttgaatacatagtcttaaaattcctatgaaataggtacacaatcaattacttgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagttgaatacatagtcttaaaattcctatgaaataggtacacaatcaattacttgttg 500
Query: 301 gagctgaaggaaaaaaatgcaatattaaaaagtgtactgaccacaccctacaatcatggt 360
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 501 gagctgaaggaaaaaaatgcaatattaaaaagtgtactgaccatagtctacaatcatggt 560
Query: 361 gtgacaagaaaatgcatttagtgatgtatttaaagaaaagagtgagcaagattatactat 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 gtgacaagaaaatgcatttagtgatgtatttaaagaaaagagtgagcaggattatactat 620
Query: 421 acaattaaactgccatcaaagattaaatcaacatggcttcccaaattataggaaataaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaattaaactgccatcaaagattaaatcaacatggcttcccaaattataggaaataaaa 680
Query: 481 acaaacagagtttgaatattaatggaaacattatagatgttctcatagactgtagtttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 acaaacagagtttgaatattaatggaaacattatagatgttctcatagattgtagtttaa 740
Query: 541 agctaacaataaaggccaagttacccttgaggggaaactcgtagctcagatcactttaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agctaacaataaaggccaagttacccttgaggggaaactcgtagctcagatcactttaat 800
Query: 601 attgagtcgtttaaaatgacaatgaattatt 631
|||||||||||||||||||||||||||||||
Sbjct: 801 attgagtcgtttaaaatgacaatgaattatt 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
