Query= MSMg01no148_l16.b1 MSMg01no148_l16.b1 CHROMAT_FILE:
MSMg01no148_l16.b1 PHD_FILE: MSMg01no148_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:43 2005
(334 letters)
>mm_chr7_88187402_88188135
Length = 734
Score = 615 bits (318), Expect = e-180
Identities = 330/334 (98%)
Strand = Plus / Minus
Query: 1 aagaatctcttgggttgaaaaccctttgatggaaagatgtccagagaatatcaatagacc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 534 aagaatctcttgggttgaaaacccttcgatggaaagatgtccagagaatatcaatagacc 475
Query: 61 ttaaggctaatgctgccaggccagtccttggaggtggctcttgaccagtactgacacccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttaaggctaatgctgccaggccagtccttggaggtggctcttgaccagtactgacacccc 415
Query: 121 actacaccaccctgctcctttagaactctccagagaaccaagatgtataggactcctgct 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 accacaccaccctgctcctttagaactctccagagaaccaagatgtataggactcctgct 355
Query: 181 ttcccaagcacaagccccagaacctagagctcccgtgggcagcaggaagtgctgttttgc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 354 ttcccaagcacaagccccagaacctagagctcccgtgggcagcaggaaatgctgttttgc 295
Query: 241 ttcagatggtgcagtcagggctgtctgggaagagtctcaggtggagcagggaagggctag 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttcagatggggcagtcagggctgtctgggaagagtctcaggtggagcagggaagggctag 235
Query: 301 ctcaccagaagaggaatacaagagcctacctgca 334
||||||||||||||||||||||||||||||||||
Sbjct: 234 ctcaccagaagaggaatacaagagcctacctgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_l16.g1 MSMg01no148_l16.g1 CHROMAT_FILE:
MSMg01no148_l16.g1 PHD_FILE: MSMg01no148_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:43 2005
(341 letters)
>mm_chr7_88034158_88034898
Length = 741
Score = 555 bits (287), Expect = e-162
Identities = 322/339 (94%), Gaps = 10/339 (2%)
Strand = Plus / Plus
Query: 3 gtttttgccagtgctctcctgtctcccagcacacagacctagctaggctaggtcacaaga 62
||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 203 gtttttgcctgtgctctcctgactcccagcacacagacctggctaggctaggtcacaaga 262
Query: 63 tgtagaactaaaaaagaaaatgaaacagagccagctacagacagtgtcctaactccactg 122
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtagaactaaaaaagaaaacgaaacagagccagctacagacagtgtcctaactccactg 322
Query: 123 tcctgggacttgaagggaaggctctcacagtctttaaggcccacatagtcctggtgttct 182
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tccagggacttgaagggaaggctctcacagtctttaaggcccacatagtcctggtgttct 382
Query: 183 ccttcagctaatgctttccccaccaccaccatcggtggcatgaggtggcctttcctcaca 242
||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 383 ccttcagctaatgctttccccaccaccaccatcggtggc-t---------tttcctcaca 432
Query: 243 tagctcatctgaagcgaagtctgcgtcgcctctgtgaatctctgagcccatcccgatctc 302
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 433 tagctcatctgaagggaagtctgtgtcgcctctgtgaatctctgagcccatcccgatctc 492
Query: 303 ctgtcactctactttctgtagcagttggccctcttttct 341
|||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctgtcactctactttctgtagcagttggccctcttttct 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
