Query= MSMg01no148_l23.b1 MSMg01no148_l23.b1 CHROMAT_FILE:
MSMg01no148_l23.b1 PHD_FILE: MSMg01no148_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:45 2005
(547 letters)
>mm_chr7_29571604_29572550
Length = 947
Score = 934 bits (483), Expect = 0.0
Identities = 531/547 (97%), Gaps = 5/547 (0%)
Strand = Plus / Plus
Query: 1 tcagaaagaatgtgtctgggccgaggctgtaactcagcggcagtgcttgcctggcgtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tcagaaagaatgtgtctgggccgaggctgtaactcagcggcagtgcttgcctggcgtatg 265
Query: 61 tgaggccctgagttcaatccttagcaccaccaaagacgaagacgattattagttttggac 120
| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 266 cgcggccctgagttcaatcctcagcaccaccaaagacgaagacggttattagttttggac 325
Query: 121 tagagagatggcttactgattaagagcactttctgttcccagcacccatgtcaggtggct 180
||||||||||| ||||||||||||| | ||| |||| |||||||||||||||||||||||
Sbjct: 326 tagagagatggtttactgattaaga-c-ctt-ctgtccccagcacccatgtcaggtggct 382
Query: 181 cacaactgcctttaatcccggctcctgggcatctgacgccctctcagtcctctgagcact 240
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 383 cacaactgcctttaaccccggctcctgggcatctgacgcc-tctcagtcctctgagcact 441
Query: 241 cacacatagagagcatacatgcagtcagataaaaagaagccaagtggtggtggtgcacac 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cacacatagagagcacacatgcagtcagataaaaagaagccaagtggtggtggtgcacac 501
Query: 301 tttaattccagcacttgggagacagaggcaggtgaatctgagtttgacaccagcctggtc 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 502 tttaattccagcacttgggagacagaggcaggtgaatctgagtttgagaccagcctggtc 561
Query: 361 tccttagtaaatttccatattagtcaggactatatacatatagacactatctaatcagtc 420
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 562 tccttagtaaatt-ccatattagtcaggactatatacatatagacaccatctaatcaatc 620
Query: 421 aatcaataacaagttggctaacttctaagaaacagtaattatggttggcctcttggttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatcaataacaagttggctaacttctaagaaacagtaattatggttggcctcttggttga 680
Query: 481 cctctagcctgacctccaggtccacatgtgtacaaatatagacacatagcccactaccat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctctagcctgacctccaggtccacatgtgtacaaatatagacacatagcccactaccat 740
Query: 541 acacaca 547
|||||||
Sbjct: 741 acacaca 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_l23.g1 MSMg01no148_l23.g1 CHROMAT_FILE:
MSMg01no148_l23.g1 PHD_FILE: MSMg01no148_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:45 2005
(258 letters)
>mm_chr7_29746150_29746807
Length = 658
Score = 476 bits (246), Expect = e-139
Identities = 246/246 (100%)
Strand = Plus / Minus
Query: 12 gtgtgtgtgtgttggggggtggttctagaagagatgaagaatcaggaaaggtaaaaaggg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gtgtgtgtgtgttggggggtggttctagaagagatgaagaatcaggaaaggtaaaaaggg 398
Query: 72 ggcactaaggagaggattgtggaatcctgagacagggaggggggcctgcatgggctaggg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggcactaaggagaggattgtggaatcctgagacagggaggggggcctgcatgggctaggg 338
Query: 132 tgtgtggtgagtaggtgttaagatggtctgatgggactaggggtctgagaaggtaggtgt 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tgtgtggtgagtaggtgttaagatggtctgatgggactaggggtctgagaaggtaggtgt 278
Query: 192 tcaggacagaagttaggggcctaggaacaaaaaagatgtttgtgtgaggagggtgagatt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tcaggacagaagttaggggcctaggaacaaaaaagatgtttgtgtgaggagggtgagatt 218
Query: 252 tattga 257
||||||
Sbjct: 217 tattga 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
