Query= MSMg01no149_j18.b1 MSMg01no149_j18.b1 CHROMAT_FILE:
MSMg01no149_j18.b1 PHD_FILE: MSMg01no149_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:56 2005
(244 letters)
>mm_chr7_4396588_4397229
Length = 642
Score = 449 bits (232), Expect = e-131
Identities = 239/242 (98%), Gaps = 2/242 (0%)
Strand = Plus / Minus
Query: 2 agtatggcttttccgggagaggagggcgggtcacctcttcaaggtcacctagggagaagg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtatggcttttccgggagaggagggcgggtcacctcttcaaggtcacctagggagaagg 285
Query: 62 ggtggagcatggatcttgtgctcattttatctctggacccctctacttctctaccctttc 121
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 284 ggtggagcatggatcttgtgctcattttatctctggaccactc--cttctctaccctttc 227
Query: 122 ctctttgcccagcctgtttgcctccccttccttcctttcttccctttcctctcctccccc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctctttgcccagcctgtttgcctccccttccttcctttcttccctttcctctcctccccc 167
Query: 182 gtccttctttccttccttgcgtttttcagactgggtctcaccatgaagccttggctggcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 gtccttctttccttccttgcgtttttcagactgggtctcaccatgaagccttggctggcc 107
Query: 242 tg 243
||
Sbjct: 106 tg 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 642
Length adjustment: 9
Effective length of query: 235
Effective length of database: 633
Effective search space: 148755
Effective search space used: 148755
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no149_j18.g1 MSMg01no149_j18.g1 CHROMAT_FILE:
MSMg01no149_j18.g1 PHD_FILE: MSMg01no149_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:56 2005
(421 letters)
>mm_chr7_4277442_4278261
Length = 820
Score = 768 bits (397), Expect = 0.0
Identities = 414/421 (98%), Gaps = 5/421 (1%)
Strand = Plus / Plus
Query: 1 aggaactagcttggaaaataaaaatgtctaaaaaatgcaaaaataacatcgaaatgtgca 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 aggaactagcttggaaaataaaaatgtct-aaaaatgcaaaaataacatcgaaatgtgca 259
Query: 61 tataagacactctctgaacataattagatatttctatgtcaacaattcaccaaataagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tataagacactctctgaacataattagatatttctatgtcaacaattcaccaaataagat 319
Query: 121 acaacatatgtatatgtgtattatgtatatatatatacatatatatatgtgtgtgtgtat 180
||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
Sbjct: 320 acaacatatgtatatgtgtattatg--tatatatatac--atatatatgtgtgtgtgtgt 375
Query: 181 atatatatatacatgtgtgtatacacacatacatatatacatgggtatttatgaataatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atatatatatacatgtgtgtatacacacatacatatatacatgggtatttatgaataatg 435
Query: 241 gtaactgtataggacaggaaatattgctcaggggttaagaatatgttctttactattaga 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtaactgtattggacaggaaatattgctcaggggttaagaatatgttctttactattaga 495
Query: 301 agatccaacttaaattcaaaatggccatatgaggaggctcactactgtgaatgactccag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agatccaacttaaattcaaaatggccatatgaggaggctcactactgtgaatgactccag 555
Query: 361 ctctaggtgattcaaacagtcaaatcttctacctttacatagaatgagcactcacatact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctctaggtgattcaaacagtcaaatcttctacctttacatagaatgagcactcacatact 615
Query: 421 c 421
|
Sbjct: 616 c 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
