Query= MSMg01no149_j24.b1 MSMg01no149_j24.b1 CHROMAT_FILE:
MSMg01no149_j24.b1 PHD_FILE: MSMg01no149_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:57 2005
(326 letters)
>mm_chr7_18884042_18884767
Length = 726
Score = 600 bits (310), Expect = e-176
Identities = 310/310 (100%)
Strand = Plus / Minus
Query: 1 catcctaagtcacagagtgtcctatcctctctgtctgagtcaatgtcttaaggaagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 catcctaagtcacagagtgtcctatcctctctgtctgagtcaatgtcttaaggaagaaga 251
Query: 61 agataaagaaagagaagcagcagttggtgcagaactgaaggagactgaaggaaggggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agataaagaaagagaagcagcagttggtgcagaactgaaggagactgaaggaaggggcag 191
Query: 121 agtcaggcagatcctgagagatcctggcttgccttcccagagaaagaggtgagcatctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 agtcaggcagatcctgagagatcctggcttgccttcccagagaaagaggtgagcatctgg 131
Query: 181 ttcaggatgagactttgtctcaaagattaaggtggtgaatgataggagaagacaccttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ttcaggatgagactttgtctcaaagattaaggtggtgaatgataggagaagacaccttat 71
Query: 241 atccttttctggttttcatatatgcatactggggtgcatgcacttatacaccaatataca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atccttttctggttttcatatatgcatactggggtgcatgcacttatacaccaatataca 11
Query: 301 ggcaacacca 310
||||||||||
Sbjct: 10 ggcaacacca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_j24.g1 MSMg01no149_j24.g1 CHROMAT_FILE:
MSMg01no149_j24.g1 PHD_FILE: MSMg01no149_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:12:58 2005
(438 letters)
>mm_chr7_18763302_18764140
Length = 839
Score = 826 bits (427), Expect = 0.0
Identities = 436/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 actgtctgactgagaaaactatcaagcctcaggcaaattgtcctgccatggaaaaatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtctgactgagaaaactatcaagcctcaggcaaattgtcctgccatggaaaaatcaa 260
Query: 61 acgctatgactattgatgtccttatgttcttaaactttctgtaaatccttatgagtcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgctatgactattgatgtccttatgttcttaaactttctgtaaatccttatgagtcatt 320
Query: 121 gaggggggg-tggatcctgacacctcggagcacaggagaagcctcacagctcctggtaag 179
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggggggggtggatcctgacacctcggagcacaggagaagcctcacagctcctggtaag 380
Query: 180 aatgggtccagtaaatcatgaacatcaattagcttaccaaagtgcctctaattcagttcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgggtccagtaaatcatgaacatcaattagcttaccaaagtgcctctaattcagttcc 440
Query: 240 aggttcaataaaactctactctggggcttttaagtgtggctctggggctaaagagatagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggttcaataaaactctactctggggcttttaagtgtggctctggggctaaagagatagt 500
Query: 300 tcagtgtgtaaaatgtttgctgttcaagtatgagtgcctaagttaaatactcagaaccta 359
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagtgcgtaaaatgtttgctgttcaagtatgagtgcctaagttaaatactcagaaccta 560
Query: 360 tataaagccagaactgtagtctactcccaggactcccatgaaagacttggatcatctttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tataaagccagaactgtagtctactcccaggactcccatgaaagacttggatcatctttg 620
Query: 420 agaagcttgagtgccagca 438
|||||||||||||||||||
Sbjct: 621 agaagcttgagtgccagca 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 839
Length adjustment: 9
Effective length of query: 429
Effective length of database: 830
Effective search space: 356070
Effective search space used: 356070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
