Query= MSMg01no150_k12.b1 MSMg01no150_k12.b1 CHROMAT_FILE:
MSMg01no150_k12.b1 PHD_FILE: MSMg01no150_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:16 2005
(225 letters)
>mm_chr7_91593162_91593788
Length = 627
Score = 420 bits (217), Expect = e-122
Identities = 224/227 (98%), Gaps = 2/227 (0%)
Strand = Plus / Minus
Query: 1 agggttgcttgatttagcctgtgaggtaacagggtcctttcagtcagagtgttgaagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agggttgcttgatttagcctgtgaggtaacagggtcctttcagtcagagtgttgaagaga 368
Query: 61 tgaaggatatatctctcatgggctccaggcctaccaggtgtctagggagccatttccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgaaggatatatctctcatgggctccaggcctaccaggtgtctagggagccatttccaca 308
Query: 121 acaagagcctgagcaggcagctccataccaccatgtacctccaagggaggagacaggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 acaagagcctgagcaggcagctccataccaccatgtacctccaagggaggagacaggctt 248
Query: 181 ctggc--gggggaacagtttggataaaggctgggcatcctagagagc 225
||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 247 ctggcgggggggaaaagtttggataaaggctgggcatcctagagagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 627
Length adjustment: 9
Effective length of query: 216
Effective length of database: 618
Effective search space: 133488
Effective search space used: 133488
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no150_k12.g1 MSMg01no150_k12.g1 CHROMAT_FILE:
MSMg01no150_k12.g1 PHD_FILE: MSMg01no150_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:16 2005
(334 letters)
>mm_chr7_91445575_91446308
Length = 734
Score = 605 bits (313), Expect = e-177
Identities = 328/333 (98%)
Strand = Plus / Plus
Query: 1 tctttgcaactgtatagggcaatgagaaaatcctcaaactggagggatccaggagtgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgcaactgtatagggcaatgagaaaatcctcaaactggagggatccaggagtgtgg 260
Query: 61 ggcctgccaacccttctagatgttaattattgggagactcatcttggtattgtgaaatgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ggcctgccaacccttctagatgttaattattgggagactcatcttggtatggtgaaatgg 320
Query: 121 accaaataatgtcagggtcatggtgtagagaaagatagggtgaacaacacaagcaacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accaaataatgtcagggtcatggtgtagagaaagatagggtgaacaacacaagcaacatg 380
Query: 181 gtctgcttagtacctggccaacctcaggtaacacacaagtggcagaaagggagatgacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctgcttagtacctggccaacctcaggtaacacacaagtggcagaaagggagatgacag 440
Query: 241 aggatagatgtttgttttaaaagatgattatagacttgagagataaatagatggtaaatg 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggatagatgcgggttttaaaagatgattatagacttgagagataaatagatggtaaatg 500
Query: 301 caagagcggatagatttatagattgctgacaga 333
||||||||||||||||||||||||| |||||||
Sbjct: 501 caagagcggatagatttatagattggtgacaga 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
