Query= MSMg01no152_b17.b1 MSMg01no152_b17.b1 CHROMAT_FILE:
MSMg01no152_b17.b1 PHD_FILE: MSMg01no152_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:07 2005
(554 letters)
>mm_chr7_89652177_89653129
Length = 953
Score = 1002 bits (518), Expect = 0.0
Identities = 543/552 (98%), Gaps = 3/552 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttagctatgctaaaggaggagagagggacgcaaagcaggtcctccctcacag 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ggaattctttagctatgataaaggaggagagagggacgcaaagcaggtcctccctcacag 819
Query: 64 ccctcagacagagccaatcccgctaacaccttagttttgcatattaagcatccagaatga 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 818 ccctcagacagagccaatcccgctaacaccttagttttgcatattaagcctccagaatga 759
Query: 124 taagagagtccctctctttcccgcacattctatctctgcgtactctgttaatacaacctc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 taagagagtccctctctttcccgcacattctatctctgcgtactctgttaatacaacctc 699
Query: 184 tggaaccctaggcaggtcctgactctaagccactccccaactctcatccctcatccctgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tggaaccctaggcaggtcctgactctaagccactccccaactctcatccctcatccctgc 639
Query: 244 ctcctgcctgt-atcctaaagcacttgggaatttgtggctttcacttctgctgcccccgt 302
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctcctgcctgtgttcctaaagcacttgggaatttgtggctttcacttctgctgcccccgt 579
Query: 303 gtggtgagaccatggtatgttctctagcagaaaggaatccaggcagtcagaggagctagc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gtggtgagaccatggtatgttctctagcagaaaggaatccaggcagtcagaggagctagc 519
Query: 363 ataattccctagcaagactctgggaagagggcatacaaactatcagagctgggtcaggga 422
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ataattctctagcaagactctgggaagagggcatacaaactatcagagctgggtcaggga 459
Query: 423 aacctgaagacaggttgcacacttgaaagctaggggaaagcaaccagaaaacatacgccc 482
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aacctgaagacaggttgcatgcttgaaagctaggggaaagcaaccagaaaacatacgccc 399
Query: 483 acgggagcataaagtatctaaactgaatgaaagtgactctgcctcaacaaccggttgtag 542
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 398 acgggagcataaagtatctaaactgaatgaaagtga--ctgcctcaacaaccggttgtag 341
Query: 543 agggaaaacatc 554
||||||||||||
Sbjct: 340 agggaaaacatc 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 953
Length adjustment: 10
Effective length of query: 544
Effective length of database: 943
Effective search space: 512992
Effective search space used: 512992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_b17.g1 MSMg01no152_b17.g1 CHROMAT_FILE:
MSMg01no152_b17.g1 PHD_FILE: MSMg01no152_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:07 2005
(453 letters)
>mm_chr7_89515878_89516730
Length = 853
Score = 837 bits (433), Expect = 0.0
Identities = 448/453 (98%)
Strand = Plus / Plus
Query: 1 cagtcaggacttacatactgttcttcctcagtccagcatgccttccaggccctatcgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cagtcaggacttacatactgttcttcctcagtccagcatgccttccagggcctatcgagc 260
Query: 61 gttcccctccagcatgggtttcttccaagacctatagggtggtctcctgacacatactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttcccctccagcatgggtttcttccaagacctatagggtggtctcctgacacatactat 320
Query: 121 ccctcccaggacctatagagtggtctctttaaatagaattcttgcaggtcttgtagagta 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ccctcccaggacctatagagtggtctctttaaacagaattcttgcaggtcttgtagagta 380
Query: 181 gtcgctctatacatatcacctgctggggcctatagagtggtttccttcagcctgcacagg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttgctctatacatatcacctgctggggcctatagagtggtttccttcagcctgcacagg 440
Query: 241 gaatttctgctcagatccatatagttttacctcagcacagaattcttgtctcttgccagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 gaatttctgctcagatccatatagttttacctcagcacagaattcttgtctcttgtcagg 500
Query: 301 atgctgtagagattctagggctagaacaaaaaagtccccccaacttctgcatagcaccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgctgtagagattctagggctagaacaaaaaagtccccccaacttctgcatagcaccct 560
Query: 361 tctcaagtagttttctcctaccaacccacatccttcctataaaatagcattcccttctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcaagtagttttctcctaccaacccacatccttcctataaaatagcattcccttctcc 620
Query: 421 actgacttccttggcagggcctgttggcctaac 453
||||||||||||||||||| |||||||||||||
Sbjct: 621 actgacttccttggcagggtctgttggcctaac 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
