Query= MSMg01no152_n22.b1 MSMg01no152_n22.b1 CHROMAT_FILE:
MSMg01no152_n22.b1 PHD_FILE: MSMg01no152_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:05 2005
(657 letters)
>mm_chr7_26051231_26052288
Length = 1058
Score = 808 bits (418), Expect = 0.0
Identities = 441/450 (98%), Gaps = 5/450 (1%)
Strand = Plus / Minus
Query: 4 gaattcttgccc---gtgtcactgacctgacgccccttcagatgggcttgatgaaatata 60
|||||||||||| || || ||| |||||||||||||||||||||||||||||||||||
Sbjct: 448 gaattcttgcccagagt-tc-ctgccctgacgccccttcagatgggcttgatgaaatata 391
Query: 61 agttgagataaacccctttctcattgagctgcttttagttattctgctttccttatgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 agttgagataaacccctttctcattgagctgcttttagttattctgctttccttatgctt 331
Query: 121 gcactatgctctgtaagagaatgttctgggatatatggctgcttcacataggacatgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gcactatgctctgtaagagaatgttctgggatatatggctgcttcacataggacatgcaa 271
Query: 181 aaagcacccattatctatggcacttacagtgaggcaacttctcgatatctacagcaagtt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 270 aaagcacccattatctatggcacttacagtgaggcaacttctcgatatctacaggaagtt 211
Query: 241 cccaccgtgccgcagaccctattgatcccttgtctgcatggaacgggtctctagtctcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cccaccgtgccgcagaccctattgatcccttgtctgcatggaacgggtctctagtctcag 151
Query: 301 gtgggcaaggagtcagcgggaattgatggacagactcaacacaagggagtgtggatctga 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 150 gtgggcaaggagtcagcgggaatggatggacagactcaacacaagggagtgtggatctga 91
Query: 361 atgtaatttgtcaaatcgagcatcaaactttttatacagaagaaaatagggaagatgggt 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 atgtaatttgtcaaattgagcatcaaactttttatacagaagaaaatagggaagatgggt 31
Query: 421 gacaccagcaaggtacaaagaggttactgg 450
||||||||||||||||||||||||||||||
Sbjct: 30 gacaccagcaaggtacaaagaggttactgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space: 678056
Effective search space used: 678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no152_n22.g1 MSMg01no152_n22.g1 CHROMAT_FILE:
MSMg01no152_n22.g1 PHD_FILE: MSMg01no152_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:05 2005
(598 letters)
>mm_chr7_25922775_25923773
Length = 999
Score = 1060 bits (548), Expect = 0.0
Identities = 586/600 (97%), Gaps = 7/600 (1%)
Strand = Plus / Plus
Query: 1 tattcccagcacacacatcgtgtgactcacaaccaccaaaaacagtaactccaaaggacc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 tattcccagcacacacatcgtgtgactcacaaccaccaaaaacaataactccaaaggacc 264
Query: 61 caactcctctagcttccgtgaacaccggaacacacccataacacacacatacacacaaac 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 caactcctctagcttccgtgaacaccggaacacacccataacacacac--acacacaaac 322
Query: 121 ataaaaataataaggctggcacctgcttttattcccagaactcaagagtcagagtcaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ataaaaataataaggctggcacctgcttttattcccagaactcaagagtcagagtcaggc 382
Query: 181 agatatctgtgagttcaagaccacgcagtgagttccaggacagctggagcaaaataatgg 240
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 383 agatatctgtgaattcaagaccaagcagtgagttccaggacagctggagcaaaataatgg 442
Query: 241 agagagcttgtctcaaagacacccccccccacacacacacacaggatagaatgaacactt 300
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 443 agagagcttgtctcaaagaca--cccccccacacacacacacaggatagaacgaacactt 500
Query: 301 ggaatgaactggaggagggtatgctataagaaagctgccctgatgaagc-ctgtttacat 359
||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||||
Sbjct: 501 ggaataaactggaggagggtatgctataagaaagctgctctgatgaagcgc-gtttacat 559
Query: 360 agcaatctgattgacttcagactgtacagacttcagaagacaaagcatgtg-tgcggtat 418
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 560 agcaatctgattgacttcagactgtacagacttcagaagacaaagcatgtgatgcggtat 619
Query: 419 ttccagacagtgtgaacagaggaggtggtggcccctaagtggtaaacagcatcgaggctg 478
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttccaggcagtgtgaacagaggaggtggtggcccctaagtggtaaacagcatcgaggctg 679
Query: 479 gcatagctgagtgctgggagaggggaagaggctgtgctgggcaacgctgtggagaggcag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gcatagctgagtgctgggagaggggaagaggctgtgctgggcaacgctgtggagaggcag 739
Query: 539 cagggctgaagcactcaggccttgcggccatattagctttggatggcagagaggtagctc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cagggctgaagcactcaggccttgcggccatattagctttggatggcagagaggtagctc 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space: 581532
Effective search space used: 581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
