Query= MSMg01no153_c06.b1 MSMg01no153_c06.b1 CHROMAT_FILE:
MSMg01no153_c06.b1 PHD_FILE: MSMg01no153_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:27 2005
(570 letters)
>mm_chr7_109266558_109267527
Length = 970
Score = 998 bits (516), Expect = 0.0
Identities = 553/576 (96%), Gaps = 19/576 (3%)
Strand = Plus / Plus
Query: 1 gaggcctgtgtgaagcagccagttgaagaatcatcgctaccttagaaagcagtgactcct 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 195 gaggcctgtgtgaagcagccagttgaggaatcatcgctaccttagaaagcagtgactcct 254
Query: 61 ggtttaagaacctccagtacagagcaggctttgaa-----aagtatattcagggccgggc 115
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 255 ggtttaagaacctccagtacagagcaggctttgaatagaaaagtatattcagggccgggc 314
Query: 116 agtggtggcgcacgcctttaatcccagcacttggtaggcagaggcaggcggatttctgag 175
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 315 agtggtggcgcacgcctttaatcccagcacttggtaggcagaggcaagcggatttctgag 374
Query: 176 cttgaggcctagtgcctgtggaagccagagagcggcggaccctcaagaactagaatctgg 235
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctcgaggcctagtgcctgtggaagccagagagcggcggaccctcaagaactagaatctgg 434
Query: 236 gacagttctgagccactttatgggtgctgagaatcaagcctgggtcctcttgagaagcag 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aacagttctgagccactttatgggtgctgagaatcaagcctgggtcctcttgagaagcag 494
Query: 296 ccagtgttcttcaccactaggccatcttccagcccca-tttctcagaactcttactaggg 354
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 495 ccagtgttcttcaccactaggccatcttccagccccaatttctcagaactcttactaggg 554
Query: 355 gatggagacaagagcatcaccctggaactgacctgccatctagcctggagaaggcagcat 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gatggagacaagagcatcaccctggaactgacctgccatctagcctggagaaggcagcat 614
Query: 415 ggcagcaggaattagagaccctgcctcaaagaggaggaaggcagtaacagtttccaagtt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ggcagcaggaattagagaccctgcctcaaagaggaggaaggcagtaacagtttccaagtt 674
Query: 475 gtcctgaccttgggcacacatgatgctcacaaataaatactggatagttaaatgctgagc 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtcctgaccttgggcacacatgatgctcacaaataaatactggatagttaaatgctgagc 734
Query: 535 tcagattcggagcatacttctccatctgcagtaatg 570
|||||||||||||||||||||||
Sbjct: 735 -------------atacttctccatctgcagtaatg 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_c06.g1 MSMg01no153_c06.g1 CHROMAT_FILE:
MSMg01no153_c06.g1 PHD_FILE: MSMg01no153_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:27 2005
(629 letters)
>mm_chr7_109348825_109349852
Length = 1028
Score = 1178 bits (609), Expect = 0.0
Identities = 624/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Minus
Query: 1 tacctagcctcctttcctgtctctcttaccccatccaagacaaaaagtacacagtgctta 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 828 tacctagcctcctttcctgtctgtcttaccccatccaagacaaaaagtacacagtgctta 769
Query: 61 cttaccagctgcttctgcagaaagagtgctgtgaggtccagggcagcctggaactagtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 cttaccagctgcttctgcagaaagagtgctgtgaggtccagggcagcctggaactagtgt 709
Query: 121 gagatcttgttgagaccttgtctcaaacaaaaacatactcatttcttttattaattcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gagatcttgttgagaccttgtctcaaacaaaaacatactcatttcttttattaattcaat 649
Query: 181 aactatgggtagtgattcctcccttttctactattatcatggattaaaagagaaacaaaa 240
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 648 aactatgggtagtgattcctcccttttctagtattatcatgtattaaaagagaaacaaaa 589
Query: 241 aagtgctttgtaaagtagaaagtaaattctcagtctgcgcatctacaggtgcctactgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 aagtgctttgtaaagtagaaagtaaattctcagtctgcgcatctacaggtgcctactgtg 529
Query: 301 tttgcgctttgctgactttgttacaaatgagttcaggggagtagaaaggaagacttagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tttgcgctttgctgactttgttacaaatgagttcaggggagtagaaaggaagacttagtt 469
Query: 361 aacatttgtagaatgttttagaattagaaagcagcaagctgggaggggccttgaagcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aacatttgtagaatgttttagaattagaaagcagcaagctgggaggggccttgaagcctc 409
Query: 421 acaaagtcgttcacattgtcagtgcttagaggtttggattctttgttgttgtttaacttt 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 408 acaaagtcgttcacattgtcagtgcttagaggtttgg-ttctttgttgttgtttaacttt 350
Query: 481 ttgaggtagataactaattttgttgttgtatccagagttaacttagtgtacaaaatttag 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttgaggtagaaaactaattttgttgttgtatccagagttaacttagtgtacaaaatttag 290
Query: 541 atatatgataaagtaagacatcaccatctagagttcaaacttgcagacattgggggaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atatatgataaagtaagacatcaccatctagagttcaaacttgcagacattgggggaata 230
Query: 601 tatttctgtttatgagttagattactgat 629
|||||||||||||||||||||||||||||
Sbjct: 229 tatttctgtttatgagttagattactgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1028
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1018
Effective search space: 630142
Effective search space used: 630142
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
