Query= MSMg01no153_m01.b1 MSMg01no153_m01.b1 CHROMAT_FILE:
MSMg01no153_m01.b1 PHD_FILE: MSMg01no153_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:11 2005
(551 letters)
>mm_chr7_20258572_20259522
Length = 951
Score = 903 bits (467), Expect = 0.0
Identities = 544/605 (89%), Gaps = 58/605 (9%)
Strand = Plus / Minus
Query: 5 gaattcacattgtataccggactgaactt-aacttgaacacatagagagccatctgcctc 63
|||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 893 gaattcacattgtagactggactgaacttcaacttgaacacatagagagccatctgcctc 834
Query: 64 tgcctcctaagttctaggattaaatgcatgtactactatgcctggctacacacaca--ca 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 833 tgcctcctaagttctaggattaaatgcatgtactactatgcctggctacacacacacgca 774
Query: 122 cgcacgcacgcacgcacgcacgcacgcacgcacgcgtgcgcgcccaggtgtaatggcaca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 cgcacgcacgcacgcacgcacgcacgcacgcacgcgtgcgcgcccaggtgtaatggcaca 714
Query: 182 cacaatcaacactactgcttgagagctcaagataggtgactctctgagtttgaagccagt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cacaatcaacactactgcttgagagctcaagataggtgactctctgagtttgaagccagt 654
Query: 242 ctgttttacagagtgagctccaggccaatcagtgctacacagtgagaccttgtgttatcc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ctgttttacagagtgagctccaggccaatcagtgctacacagtgagaccttgtgttatcc 594
Query: 302 tgcccccctttgccacccctccctcctaaaaaagcaaccctctagagtagaattccagga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tgcccccctttgccacccctccctcctaaaaaagcaaccctctagagtagaattccagga 534
Query: 362 gagacctcatctgaattaacaggtttcaaatcttggttg------------------at- 402
||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 533 gagacctcatctgaattaacaggtttcaaatcttggttgggcaggaatagggacagaata 474
Query: 403 -------------------------------ca-----cagtgatccctctgtctaacac 426
|| ||||||||||||||||||||||
Sbjct: 473 gggtcccacccacgcctggcgaacaggaacgcagttcccagtgatccctctgtctaacac 414
Query: 427 aaccctgtccttaatgctccaggtcccagacagcatggggtctcggttcttcctggctct 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aaccctgtccttaatgctccaggtcccagacagcatggggtctcggttcttcctggctct 354
Query: 487 attcctggtcatcctgatgttgggaaatggtaagtgggtcgggtggcaagatggcggtag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 353 attcctggtcatcctgatgttgggaaatggtaagtgggtcgggtggcaagatggcgggag 294
Query: 547 gagtg 551
|||||
Sbjct: 293 gagtg 289
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_m01.g1 MSMg01no153_m01.g1 CHROMAT_FILE:
MSMg01no153_m01.g1 PHD_FILE: MSMg01no153_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:12 2005
(233 letters)
>mm_chr7_20161005_20161637
Length = 633
Score = 395 bits (204), Expect = e-114
Identities = 219/224 (97%)
Strand = Plus / Plus
Query: 1 actgggctgcctgaagacacctgggaccggacacacaagggccctaaatgtactggagct 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 201 actgggctgcctgaagacacctggggccggacacacaagggccctaaatgtaccagagct 260
Query: 61 tgtggtgggtgggtgggggaggacattcagcaaacactcctactgtgatgtggtgggtgc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggtgggtgggtgggggaggacattcagcaaacactcctactgtgatgtggtgggtgc 320
Query: 121 caggaagaaaagagaactcagaaaggattgagggtggggcagggtgacgatgccacttca 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 caggaagaaaagagaactcagaaaggattgagggtggggcagggtgacaatgccacttca 380
Query: 181 aactgtgtacccgagagaattcatatctgaggaagttggggggg 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactgtgtacccgagagaattcatatctgaggaagttggggggg 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
