Query= MSMg01no154_l16.b1 MSMg01no154_l16.b1 CHROMAT_FILE:
MSMg01no154_l16.b1 PHD_FILE: MSMg01no154_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:26 2005
(268 letters)
>mm_chr7_144213169_144213835
Length = 667
Score = 468 bits (242), Expect = e-136
Identities = 257/262 (98%), Gaps = 1/262 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgagctcgcccccttagacagcaccatagcacacccaccaccccattttaacc 64
||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgagctggaccc-ttagacagcaccatagcacacccaccaccccattttaacc 263
Query: 65 ctcttccattatctgtctaactgtgccttgccccatgtgaaaagccaaactggagacacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcttccattatctgtctaactgtgccttgccccatgtgaaaagccaaactggagacacc 323
Query: 125 cttattctggctgcatgaacccaacagccacctggtccaccacttgtatctgatgcgtgt 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgattctggctgcatgaacccaacagccacctggtccaccacttgtatctgatgcgtgt 383
Query: 185 ctgcgttgtgggggcctgcataatgctaacctgcatgcccattctcctgatctgggaagt 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgcgttgtgggggcctgcagaatgctaacctgcatgcccattctcctgatctgggaagt 443
Query: 245 ttttgatgtggtcagttatggg 266
||||||||||||||||||||||
Sbjct: 444 ttttgatgtggtcagttatggg 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 667
Length adjustment: 9
Effective length of query: 259
Effective length of database: 658
Effective search space: 170422
Effective search space used: 170422
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no154_l16.g1 MSMg01no154_l16.g1 CHROMAT_FILE:
MSMg01no154_l16.g1 PHD_FILE: MSMg01no154_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:26 2005
(234 letters)
>mm_chr7_144294127_144294762
Length = 636
Score = 375 bits (194), Expect = e-108
Identities = 216/224 (96%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 1 ggaagcaagctcaaagggggcagctgactttggcttcccacctattcaaatgaggaagag 60
||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 424 ggaagcaagctcaaatggggcagctgactttggtttctcacctattcaaatgaggaagag 365
Query: 61 gctatgcaggtgagggaggggggag--cacagggcaggtagctgggatggcaggcagatg 118
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 364 gctatgcaggtgagggaggggggagcacacagggcaggtagctgggatggcaggcagatg 305
Query: 119 ggaagggggctgcacctgctcaagaggaagcccaccatgtaggggagcctgtttcacaca 178
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 304 ggaagggggctgcacctgctcaagaggaagcccaccatgtaggggagcctggcacacaca 245
Query: 179 tggtgactgcacttgcatccctacacctccctggagagaatggg 222
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tggtgactgcacttgcatccctacacctccctggagagaatggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 636
Length adjustment: 9
Effective length of query: 225
Effective length of database: 627
Effective search space: 141075
Effective search space used: 141075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
