CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAGAAATCCGCGGAAT
TCATTTATTTGACCTGTATTAATGCCCTAACTGGAGTGAATAAATACTCG
TTCTCATCTCTCCAGAAATAAAGCACACAATGGTGCATCTTAAGTTATCC
ATCAAGCTGTTTCCTTAAGGAGCTATAAGCTGACATGTTGCCTGTAACAT
TTAAAAAAAAACCAAACAAACAAATAAACAAAAAACACTACTGCCGGCTA
GGTACCAACCAGAGATCTCAGTCCATTCCCAGCCTGGCACATATCCCAAT
ACTGCATAATTCCCTTTTGCCAAAGCCTGTCCCACCAAAGCTGGCTCCTG
GGCTCCGAAATGGCTCTCTCCTCCCTGCAGCTTCCTGGTGCCAAACCTGC
TCAGTACTGCCAAATTTCCACAGCTAGTTGGGGCGCACTTTTGCCAACCC
AATGCTTTGCTGTGGTTATCTTGCCTTGGAGCTCAGATGAGTCGCTGGGA
ATGGAAAACACCAGACAATCTTAATTTATGATCAAGAGATAGCAAACTTC
CTGGACGCAGAATCTAGCATCCTCAATTCACCAACTATTCTGTTAGAAAT
CTGGATGCTAGTCGATTCCACCACCCGAACTAACAAGCCCAGCCTTTATC
TTGTCCACCTCGCTCCTGCCTTTTCAGAAGGAGGTCTTCCTTCCTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGA
AGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATC
AAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAA
AAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACAC
TCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCC
GTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGC
AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAATTGGTAAGAAGG
ACACATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGC
TGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA
TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATACTGAGTGAG
GTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGG
ATATTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAA

Query= MSMg01no154_m17.b1 MSMg01no154_m17.b1 CHROMAT_FILE:
MSMg01no154_m17.b1 PHD_FILE: MSMg01no154_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:31 2005
         (652 letters)



>mm_chr7_83987057_83988108
          Length = 1052

 Score =  882 bits (456), Expect = 0.0
 Identities = 489/500 (97%), Gaps = 2/500 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcatttatttgacctgt-attaatgccctaactggagtgaataaatactcgttctc 64
           |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gaattcatttatttgatctgtcattaatgccctaactggagtgaataaatactcgttctc 440

                                                                       
Query: 65  atctctccagaaataaagcacacaatggtgcatcttaagttatccatcaagctgtttcct 124
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atctctccagaaataaaacacacaatggtgcatcttaagttatccatcaagctgtttcct 380

                                                                       
Query: 125 taaggagctataagctgacatgttgcctgtaacatttaaaaaaaaaccaaacaaacaaat 184
           |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| 
Sbjct: 379 taaggagctataagctgacatgttgcctgtaaca-ttaaaaaaaaaaaaaacaaacaaac 321

                                                                       
Query: 185 aaacaaaaaacactactgccggctaggtaccaaccagagatctcagtccattcccagcct 244
           ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaataaaaaacactactgccagctaggtaccaaccagagatctcagtccattcccagcct 261

                                                                       
Query: 245 ggcacatatcccaatactgcataattcccttttgccaaagcctgtcccaccaaagctggc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggcacatatcccaatactgcataattcccttttgccaaagcctgtcccaccaaagctggc 201

                                                                       
Query: 305 tcctgggctccgaaatggctctctcctccctgcagcttcctggtgccaaacctgctcagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcctgggctccgaaatggctctctcctccctgcagcttcctggtgccaaacctgctcagt 141

                                                                       
Query: 365 actgccaaatttccacagctagttggggcgcacttttgccaacccaatgctttgctgtgg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 actgccaaatttccacagctagttggggcgcacttttgccaacccaatgctttgctgtgg 81

                                                                       
Query: 425 ttatcttgccttggagctcagatgagtcgctgggaatggaaaacaccagacaatcttaat 484
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 80  ttatcttgccttggagctcagatgagttgctgggaatggaaaacaccagacaatcttaat 21

                               
Query: 485 ttatgatcaagagatagcaa 504
           |||||||||| |||||||||
Sbjct: 20  ttatgatcaacagatagcaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)