Query= MSMg01no154_n15.b1 MSMg01no154_n15.b1 CHROMAT_FILE:
MSMg01no154_n15.b1 PHD_FILE: MSMg01no154_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:36 2005
(612 letters)
>mm_chr7_117605228_117606238
Length = 1011
Score = 1027 bits (531), Expect = 0.0
Identities = 549/555 (98%), Gaps = 1/555 (0%)
Strand = Plus / Minus
Query: 58 taagattccattcttttcataggtcaagaggctgatttcaagggcttgagacatagctca 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1011 taagattccattcttttcataggtcaagaggctgatttcaagggcttgagacatggctca 952
Query: 118 gtggctaagagaacatctagcatctacaccacatagcttacaaccgtctgtaagcccaac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 gtggctaagagaacatctagcatctacaccacatagcttacaaccgtctgtaagcccaac 892
Query: 178 tccagggacacctgaccttagtagccacttgtatacatgttcatggactcaccccacaca 237
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 891 tccagggacacctgaccttagtagccacttgtatgcatgttcatggactcaccccacaca 832
Query: 238 catatatataattaaaataatgaaaagaaatctttaaaaaaaaaaaaggagcccattttc 297
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 831 catatacataattaaaataatgaaaagaaatcttt-aaaaaaaaaaaggagcccattttc 773
Query: 298 agactgagttcccctttaggtggcataattagcagacatacttgatccaccttcaaacct 357
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 772 agactgagttcccctttaggtggcataattagcagacatacttgacccaccttcaaacct 713
Query: 358 acttttgacctttgtggacatatctttctttagaaagaatttttcaatatgattctgctg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 acttttgacctttgtggacatatctttctttagaaagaatttttcaatatgattctgctg 653
Query: 418 cttttttatttttgtatatagttatacctcaattatactaagtaaaaaaaaatgaccaaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 cttttttatttttgtatatagttatacctcaattatactaagtaaaaaaaaatgaccaaa 593
Query: 478 attagaagacaaaattgagtaaactctttttgtaacattgtaactttttaaaaatagatc 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 attagaagacaaaattgagtaaactctttttgtaacattgtaactttttaaaaatagatc 533
Query: 538 cctttttgtctgtatcttgatgctttaaaatattatcttagaagcagaaaaataagaatc 597
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 532 cctttttgtctgtatcttgatgcttaaaaatattatcttagaagcagaaaaataagaatc 473
Query: 598 tttgcttccatggtt 612
|||||||||||||||
Sbjct: 472 tttgcttccatggtt 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1011
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1001
Effective search space: 602602
Effective search space used: 602602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_n15.g1 MSMg01no154_n15.g1 CHROMAT_FILE:
MSMg01no154_n15.g1 PHD_FILE: MSMg01no154_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:36 2005
(625 letters)
>mm_chr7_117466520_117467544
Length = 1025
Score = 1147 bits (593), Expect = 0.0
Identities = 619/629 (98%), Gaps = 4/629 (0%)
Strand = Plus / Plus
Query: 1 actccacagaaatgtttgagggacatttgaacacttctctcaatgactattctctttaga 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actccacagaaatgcttgagggacatttgaacacttctctcaatgactattctctttaga 256
Query: 61 acccacctgtgtcacacacacacctgtgtgaagtctttcctaactattctggtacttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acccacctgtgtcacacacacacctgtgtgaagtctttcctaactattctggtacttaat 316
Query: 121 atgctgaagaatagaactttgaaaactccccaagaaaccactcacttgccccttgttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atgctgaagaatagaactttgaaaactccccaagaaaccactcacttgccccttgttact 376
Query: 181 acaaatgaagttgcaggcatcagagctttctaaggagagactgtgtcttatttcagttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acaaatgaagttgcaggcatcagagctttctaaggagagactgtgtcttatttcagttat 436
Query: 241 tgatatggatggaatctaggcacaattatctgataat---ccatgctgctttgttatctg 297
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 437 tgatatggatggaatctaggcacaattatctgataataatccatgctgcttcgttatctg 496
Query: 298 ctcattctcttattacagacagtatcccactgtatcaatactccaca-cttactcattca 356
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 497 ctcattctcttattacagacagtatcccactgtatcaatactccacaacttactcatttg 556
Query: 357 cctgttgacagatagggagcctttccatgtttttggctattgtatgtgaacaagttatga 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 557 cctgttgacagatagggagcctttccatgtttttggctattgtatgtgaacaagctatga 616
Query: 417 aggcgtatgttgcaagtgtgtgcgtagactgaagctttcatctctcttataaactgctga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aggcgtatgttgcaagtgtgtgcgtagactgaagctttcatctctcttataaactgctga 676
Query: 477 gaatgaagtgaccgagtcacagatgtgcattggtggttggttactgacatcacaactatc 536
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 677 gaatgaagtgaccgagtcacagatgtgcattggtggttggttactgatatcacaactatc 736
Query: 537 atgatgttcatttctatcacgggtaatcaattaatccccccttctttgccctgtggtcag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atgatgttcatttctatcacgggtaatcaattaatccccccttctttgccctgtggtcag 796
Query: 597 cctagctaggggttcaccaatttttattg 625
|||||||||||||||||||||||||||||
Sbjct: 797 cctagctaggggttcaccaatttttattg 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
