TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAACAAAGAATAGCCCAGTGAGAAGAGACAGGGCACATTCCTTCATT
TCTACTGACTCCCATAGGAATGTCTTCCAAGCTCCAGCCAGGTGGAAGCT
GCAATGCTGACCTGAGGTAGCTATCCAGCAGGACTTCCTTCCAACAGCTG
ATCATGGGTTTGGGCTCAAGTTCAGGTTCCTTTGGAGAACTTCCTGAGCT
CCTGGCTTCCTTTTTCAGTATGACTCTCCCTCTAGGATACTGTGGCCCTG
AACATCTCTCTTGATGCCTCTGCCTGGCCTGGAAGCCCCCTATGCAGCAC
ATCTTGGCTTATGTTATTTTGAACAATGCTTCTCTGCTCTCTTATATCAT
GGGCTCCTGAAGCCAAGATGCTGTGTACATGGCTGTCTGCCCAGCATTTA
GCACTAGGCCTGGCACATGACAGACAGTAGAGGACCATTAGTGGAACTAG
CAACAGTTGGCAAGAGGTCCACAGGAAATGTCCCCGGATGGTGATGGTGA
CGCCAATGACAGGCTTACGTCAGCACAGCCAGTGTGGATGGGCCAAATGT
AATTGGAAACATCTAAGCTGGAAACATCGTGGAGAAAACAAAGCCAGTAT
GAGCACCAAGAACCCAGCCAGAAGTAGAAGGAGCCAGTCAATGTCAGCTT
GGGTCTCTGTAGGCTAGTCTGATGGGAGGTGGGGCN

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTTCCGAATTCAAGTCAAACATTTTATTCAACATGTGT
TCAGGACTGGCCTGGTAGTAAGAAGTCAGTGATGGACACATGAGAGATAG
CTCTCTGCTGAGGTTTGTAGAGAGGTAGTTCTCTGCTGATGTGGGTAGGC
CTTCACACCTCATATGAAATAGAGATTGAGGCTTTAAAAGGTGATGGGTT
ATGAGAGGTCTAACCTCAGGAGGGGATTAATGGATTATATGAGGAGAAGA
TTAAGTATGTCAGGAATGAGCCCCTGAGAGAAATAGTAAGCCAAGTTTCT
GTTCATCTCATGTGTAGCTCTTTCCTTTTGTCCTCTGTAAGACTCAACAC
AAGGATAGGAGGGTGCTTCCTCACCGGAATGATTGACCAGATTGACACGG
CTCATCTGGCTGTCTCAGTGGGTGTCCCCCTTCCTCTGTCACCACTCCAT
GTGTTCTTGGAAGGATGGAATTCCCCACAAGATAAAGGAGATAGAGGGGG
GATCATTTTTTAGTCAAGAGCACATGAGTATCGCTGCTCCTCTGCTGCTG
ATAGAACTCCAAAGGATCGCTCAAGGCCCATTTGTACGAGGATGTAAATG
AGTCTTCTAACACTCAATATATATTCTAAATTGATGTGCTGCACATGGCC
AGCTGCCTTTTTGGCAATCCTTTTCATTTCTTCCCCCA

Query= MSMg01no155_a02.b1 MSMg01no155_a02.b1 CHROMAT_FILE:
MSMg01no155_a02.b1 PHD_FILE: MSMg01no155_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:48 2005
         (683 letters)



>mm_chr7_143518509_143519591
          Length = 1083

 Score = 1266 bits (655), Expect = 0.0
 Identities = 673/679 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaacaaagaatagcccagtgagaagagacagggcacattccttcatttctactga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacaaagaatagcccagtgagaagagacagggcacattccttcatttctactga 264

                                                                       
Query: 65  ctcccataggaatgtcttccaagctccagccaggtggaagctgcaatgctgacctgaggt 124
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 265 ctcccataggaatgtcttccaagttccagccaggtggaagctgcaattctgacctgaggt 324

                                                                       
Query: 125 agctatccagcaggacttccttccaacagctgatcatgggtttgggctcaagttcaggtt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctatccagcaggacttccttccaacagctgatcatgggtttgggctcaagttcaggtt 384

                                                                       
Query: 185 cctttggagaacttcctgagctcctggcttcctttttcagtatgactctccctctaggat 244
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctttggagaacttcctgagctcttggcttcctttttcagtatgactctccctctaggat 444

                                                                       
Query: 245 actgtggccctgaacatctctcttgatgcctctgcctggcctggaagccccctatgcagc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actgtggccctgaacatctctcttgatgcctctgcctggcctggaagccccctatgcagc 504

                                                                       
Query: 305 acatcttggcttatgttattttgaacaatgcttctctgctctcttatatcatgggctcct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acatcttggcttatgttattttgaacaatgcttctctgctctcttatatcatgggctcct 564

                                                                       
Query: 365 gaagccaagatgctgtgtacatggctgtctgcccagcatttagcactaggcctggcacat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaagccaagatgctgtgtacatggctgtctgcccagcatttagcactaggcctggcacat 624

                                                                       
Query: 425 gacagacagtagaggaccattagtggaactagcaacagttggcaagaggtccacaggaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacagacagtagaggaccattagtggaactagcaacagttggcaagaggtccacaggaaa 684

                                                                       
Query: 485 tgtccccggatggtgatggtgacgccaatgacaggcttacgtcagcacagccagtgtgga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgtccccggatggtgatggtgacgccaatgacaggcttacgtcagcacagccagtgtgga 744

                                                                       
Query: 545 tgggccaaatgtaattggaaacatctaagctggaaacatcgtggagaaaacaaagccagt 604
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 745 tgggccaaatgtaattggaaacatctaagctggaaatatcgtggagaaaacaaagccagt 804

                                                                       
Query: 605 atgagcaccaagaacccagccagaagtagaaggagccagtcaatgtcagcttgggtctct 664
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 805 atgagcaccaagaacccagccaggagtagaaggagccagtcaatgtcagcttggatctct 864

                              
Query: 665 gtaggctagtctgatggga 683
           |||||||||||||||||||
Sbjct: 865 gtaggctagtctgatggga 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no155_a02.g1 MSMg01no155_a02.g1 CHROMAT_FILE:
MSMg01no155_a02.g1 PHD_FILE: MSMg01no155_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:48 2005
         (500 letters)



>mm_chr7_143700794_143701693
          Length = 900

 Score =  911 bits (471), Expect = 0.0
 Identities = 489/495 (98%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcaagtcaaacattttattcaacatgtgttcaggactggcctggtagtaagaagtc 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gaattcaagtcaaacattttattcaacatgtgttcaggactggcctggtagtaagaagtc 499

                                                                       
Query: 66  agtgatggacacatgagagatagctctctgctgaggtttgtagagaggtagttctctgct 125
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agtgatggacacatgagaggtagctctctgctgaggtttgtagagaggtagttctctgct 439

                                                                       
Query: 126 gatgtgggtaggccttcacacctcatatgaaatagagattgaggctttaaaaggtgatgg 185
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 438 gatgtgggtaggccttcacacctcatatgaaatagagattgaggctttaagaggtgatgg 379

                                                                       
Query: 186 gttatgagaggtctaacctcaggaggggattaatggattatatgaggagaagattaagta 245
           ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 378 gttatgagaggtctaacctcaggaggggattaatgaattatatgaggggaagattaagta 319

                                                                       
Query: 246 tgtcaggaatgagcccctgagagaaatagtaagccaagtttctgttcatctcatgtgtag 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 318 tgtcaggaatgagcccctgagagaaatagtaagccaagtttctgttcatctcacgtgtag 259

                                                                       
Query: 306 ctctttccttttgtcctctgtaagactcaacacaaggataggagggtgcttcctcaccgg 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctctttccttttgtcctctgtaagactcaacacaaggataggagggtgcttcctcaccgg 199

                                                                       
Query: 366 aatgattgaccagattgacacggctcatctggctgtctcagtgggtgtcccccttcctct 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 aatgattgaccagattgacacggctcatctggctgtctcagtgggtgtcccccttcctct 139

                                                                       
Query: 426 gtcaccactccatgtgttcttggaaggatggaattccccacaagataaaggagatagagg 485
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 138 gtcaccactccatgtgttcttggaaggatggaattccccaaaagataaaggagatagagg 79

                          
Query: 486 ggggatcatttttta 500
           |||||||||||||||
Sbjct: 78  ggggatcatttttta 64


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space:   436100
Effective search space used:   436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)