Query= MSMg01no157_a06.b1 MSMg01no157_a06.b1 CHROMAT_FILE:
MSMg01no157_a06.b1 PHD_FILE: MSMg01no157_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:17 2005
(324 letters)
>mm_chr7_140234493_140235216
Length = 724
Score = 518 bits (268), Expect = e-151
Identities = 299/320 (93%), Gaps = 17/320 (5%)
Strand = Plus / Plus
Query: 5 gaattcattcagatgggacaaacttctaatgtaaacgtagacaggaggtggtgagagctt 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 222 gaattcattcagatgggacaaacttctaatgtaaacatagacaggaggtggtgagagctt 281
Query: 65 ccgggcgtgcttgccacaggattctcaaagcctcttagagcattctctgacaaagaaacc 124
| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 282 ctgggcgtgc-----------------aagcctcttagagcattctctgacaaagaaacc 324
Query: 125 ctagggtgggggactcattcccaacagccacttcccaggctgcagcatcaccctgcccag 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 ctagggtgggggactcattcccaacagccacttcccaggctgcagcatcgccctgcccag 384
Query: 185 ggatgctaaggtgacccaattctcagcccctaactgtatagctcatggtttcctctgtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggatgctaaggtgacccaattctcagcccctaactgtatagctcatggtttcctctgtgt 444
Query: 245 aaaatccagtttcttcaaatgcacagagagtgaacctctgtcaacagcttgtcttgtttt 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 aaaatccagtttcttcaaatgcacagagagtgaacctcagtcaacagcttgtcttgtttt 504
Query: 305 ctgcgaagggttatgaattt 324
||||||||||||||||||||
Sbjct: 505 ctgcgaagggttatgaattt 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_a06.g1 MSMg01no157_a06.g1 CHROMAT_FILE:
MSMg01no157_a06.g1 PHD_FILE: MSMg01no157_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:17 2005
(369 letters)
>mm_chr7_140367103_140367871
Length = 769
Score = 690 bits (357), Expect = 0.0
Identities = 366/369 (99%)
Strand = Plus / Minus
Query: 1 cacaggcatcagaaagcagactcccagtggtgaaggcccctctcatgagctgaattcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cacaggcatcagaaagcagactcccagtggtgaaggcccctctcatgagctgaattcaga 477
Query: 61 ccctttgaccccggattcacaaagtgttgtagacctgtgactttggtgaatgtccacctc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ccctttgaccctggattcacaaagtgttgtagacctgtgactttggtgaatgtccacctc 417
Query: 121 ccctgaaggactatgcaccccacagggcaagagtcagtctagctttgtttacatcttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ccctgaaggactatgcaccccacagggcaagagtcagtctagctttgtttacatcttttc 357
Query: 181 ttggagtgtaaagctgccgcgacattttttaattgcccaataaatatgtgtctgtgggta 240
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 356 ttggagtgtaaagctgccacgacatttttaaattgcccaataaatatgtgtctgtgggta 297
Query: 241 catgggtctgtgtggcacacctgcaaatgtataacctgtgtgtggaagccagaggacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 catgggtctgtgtggcacacctgcaaatgtataacctgtgtgtggaagccagaggacaac 237
Query: 301 atcaacaggcactgtccacagcagggtttttgtttggtgtgtgtttgtgtgtgtgtgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atcaacaggcactgtccacagcagggtttttgtttggtgtgtgtttgtgtgtgtgtgtgt 177
Query: 361 gtgtgtgtg 369
|||||||||
Sbjct: 176 gtgtgtgtg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
