Query= MSMg01no157_d22.b1 MSMg01no157_d22.b1 CHROMAT_FILE:
MSMg01no157_d22.b1 PHD_FILE: MSMg01no157_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:33 2005
(319 letters)
>mm_chr7_62118306_62119025
Length = 720
Score = 572 bits (296), Expect = e-168
Identities = 311/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattcttagttttgagttcaaattaccgagctcggtcctgcagccttgaagtaatcatg 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 205 gaattcttagttttgagttcaaattaccgagctcagtcctgcagccttgaagtaatcctg 264
Query: 65 cattctcttttt-aagaggctgacatgtggatgctaatcaaagacatcctgaaagttatt 123
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 265 cattctcttttttaagaggctgacatgtggatgctaatcaaagtcatcctgaaagttatt 324
Query: 124 tggtctgaagtatgtgccataaagcaattgaagcaatatggctagtgacgtctgaaaaag 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 tggtctgaagtatgtgccataaagcaattgaagcaatatggttagtgacgtctgaaaaag 384
Query: 184 tagtcagcttatatgatgagcatacagttattgttcgccattgtgaagacacactatttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagtcagcttatatgatgagcatacagttattgttcgccattgtgaagacacactatttc 444
Query: 244 tcccaacttcctgctccctttagcaagcttaatacctatttgtctagggtcatcaattga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcccaacttcctgctccctttagcaagcttaatacctatttgtctagggtcatcaattga 504
Query: 304 tatggatatggcttta 319
||||||||||||||||
Sbjct: 505 tatggatatggcttta 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_d22.g1 MSMg01no157_d22.g1 CHROMAT_FILE:
MSMg01no157_d22.g1 PHD_FILE: MSMg01no157_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:33 2005
(329 letters)
>mm_chr7_62289702_62290430
Length = 729
Score = 621 bits (321), Expect = 0.0
Identities = 327/329 (99%)
Strand = Plus / Minus
Query: 1 ccccagtgctgttcatttctaagaattctgtgtttttatagtcctcttgtgatattgtta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 706 ccccagtgctgttcatttctaagaattctgtgtttttataatcctcttgtgatattgtta 647
Query: 61 tttttatttagtgttatattttgagattataatagaaataatacatttcttctcccctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttttatttagtgttatattttgagattataatagaaataatacatttcttctcccctgt 587
Query: 121 tgcccattcagaccctcttatatattccctcccaattctgcttcaaattcatggccttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgcccattcagaccctcttatatattccctcccaattctgcttcaaattcatggccttcc 527
Query: 181 ccacctccactaattattactggatgctttgagagagacgtttaaatctaagttggccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ccacctccactaattattactggatgctttgagagagacgtttaaatctaagttggccag 467
Query: 241 ataaatttttgtattgatccagtaggtgctttatttatttgcttgcctgaccactggaca 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 466 ataaatttttgtattgatccagtatgtgctttatttatttgcttgcctgaccactggaca 407
Query: 301 gtcccttctttccattcttatggagaagg 329
|||||||||||||||||||||||||||||
Sbjct: 406 gtcccttctttccattcttatggagaagg 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
