Query= MSMg01no159_g06.b1 MSMg01no159_g06.b1 CHROMAT_FILE:
MSMg01no159_g06.b1 PHD_FILE: MSMg01no159_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:07 2005
(195 letters)
>mm_chr7_137511302_137511897
Length = 596
Score = 340 bits (176), Expect = 2e-98
Identities = 188/192 (97%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 5 gaattcccccaagagtaggccggaaagaaatac-ttagctaattagagatgatgtggacg 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattcccccaagagtaggccggaaagaaatacattagctaattagagatgatgtggacg 264
Query: 64 ttgcttggtcattttgttggccaactttcctgttgccctctctttctagatagattcttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgcttggtcattttgttggccaactttcctgttgccctctctttctagatagattcttt 324
Query: 124 ggacagggttggtgtgtggagcataagtatagcttcttttccttcatctttaaaaaatac 183
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 ggacggggttggtgtgtggagcataagtatggcttcttttccttcatctttaaaaaatac 384
Query: 184 cctttaattgag 195
||||||| ||||
Sbjct: 385 cctttaactgag 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 596
Length adjustment: 8
Effective length of query: 187
Effective length of database: 588
Effective search space: 109956
Effective search space used: 109956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no159_g06.g1 MSMg01no159_g06.g1 CHROMAT_FILE:
MSMg01no159_g06.g1 PHD_FILE: MSMg01no159_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:07 2005
(289 letters)
>mm_chr7_137663661_137664349
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 accatattgtcgactatggaaattatgccagacagacttaaacatctgtgtacgcagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 accatattgtcgactatggaaattatgccagacagacttaaacatctgtgtacgcagagg 430
Query: 61 agaaagctaaggaatattatcttggtaggagcatgcctttatttttacactttgcctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agaaagctaaggaatattatcttggtaggagcatgcctttatttttacactttgcctcac 370
Query: 121 aacctcattccctaaaacacgttctttgcaaattggagacccatggagtgaattcagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aacctcattccctaaaacacgttctttgcaaattggagacccatggagtgaattcagatt 310
Query: 181 atgtaaatgttcagcctgaagagttaaaaattctttttgagtgatatttaaaactccctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atgtaaatgttcagcctgaagagttaaaaattctttttgagtgatatttaaaactccctt 250
Query: 241 taaaagaggaaagtgtcgcttcgtcattggacattccgttctagcagag 289
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 249 taaaagaggaaagtgtcgcttcgtcattggacattccgctctagcagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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