Query= MSMg01no159_g23.b1 MSMg01no159_g23.b1 CHROMAT_FILE:
MSMg01no159_g23.b1 PHD_FILE: MSMg01no159_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:10 2005
(354 letters)
>mm_chr7_35458074_35458828
Length = 755
Score = 648 bits (335), Expect = 0.0
Identities = 347/351 (98%), Gaps = 1/351 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtttcgctagcccctgctatttctgggccacagttagctttctagctttccag 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtttcgctagcgcctgctatttctgggccacagttagctttctagctttccag 264
Query: 65 gcttctctagcatctctcacatgggtctacctagagctggttctggctccggtcagggtg 124
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 265 gcttctctagcatctctcacatgggtctgcctagagctggttctggctccagtcagggtg 324
Query: 125 accttcttggctttctgagcctctggacatctgccttccatgaatctcctaaacccctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accttcttggctttctgagcctctggacatctgccttccatgaatctcctaaacccctct 384
Query: 185 ggctgtgacttgatcctcctccccatccctctgggtccttccctatcagatggtcacttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggctgtgacttgatcctcctccccatccctctgggtccttccctatcagatggtcacttc 444
Query: 245 cagctggaaccagagggcagcctcacccttgctcagggctcctggatgaatgtggctcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagctggaaccagagggcagcctcacccttgctcagggctcctggatgaatgtggctcca 504
Query: 305 agacagaaggcag-ttcagtcacttgttccaatcctggaagattccagaga 354
||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 505 agacagaaggcagcttcagtcacttgttccaatcctggaagattccagaga 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 755
Length adjustment: 9
Effective length of query: 345
Effective length of database: 746
Effective search space: 257370
Effective search space used: 257370
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_g23.g1 MSMg01no159_g23.g1 CHROMAT_FILE:
MSMg01no159_g23.g1 PHD_FILE: MSMg01no159_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:10 2005
(294 letters)
>mm_chr7_35593641_35594334
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Minus
Query: 1 agaagagcacttaacgctgttggggaatctgggaagggctgtgtagcagtagacagccct 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agaagagcatttaacgctgttggggaatctgggaagggctgtgtagcagtagacagccct 435
Query: 61 gggcctaccctcagaactacctttcagggcatcacagaggaccagatttccgacgggggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 434 gggcctaccctcagaactacctttcagggcatcacagaggaccagatttccgatgggggc 375
Query: 121 ctgggggtgtcaacacagctgccttcccaggctgatgaggaaatgcagcctggggcttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctgggggtgtcaacacagctgccttcccaggctgatgaggaaatgcagcctggggcttgc 315
Query: 181 attcttattccctacctaggagaccctacttttgtggagctggtgctgggcagggggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 attcttattccctacctaggagaccctacttttgtggagctggtgctgggcagggggtgt 255
Query: 241 tgtctggtgacagtgagggtatggtatccgtctcctgccaaacccagcccgttc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtctggtgacagtgagggtatggtatccgtctcctgccaaacccagcccgttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
