Query= MSMg01no159_l20.b1 MSMg01no159_l20.b1 CHROMAT_FILE:
MSMg01no159_l20.b1 PHD_FILE: MSMg01no159_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:31 2005
(318 letters)
>mm_chr7_86436137_86436856
Length = 720
Score = 582 bits (301), Expect = e-171
Identities = 312/317 (98%), Gaps = 4/317 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcagtgtttcctacttctaatccaagcctctcattttacaactgagaccctta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcagtgtttcctacttctaatccaagcctctcattttacaactgagaccctta 264
Query: 65 gggccccgaaaagctaagtgacttttccaaggtgaccaggcagaacagattctagttccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 gggccccgaaaagctaagtgacttttccaaggtgaccaggcagaacagattttagttccc 324
Query: 125 aagtctcaggacctctgccaatgcagggccctccacctttaagtgatgcccttggccacg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagtctcaggacctctgccaatgcagggccctccacctttaagtgatgcccttggccacg 384
Query: 185 ggtgagcagtgcgaagcgtgggaggcacagcccagatcttcggcctgggtggaaagacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgagcagtgcgaagcgtgggaggcacagcccagatcttcggcctgggtggaaagacca 444
Query: 245 gctgagcacgtcttaagagtccagcagcagtgctgagagctcccttaatgaccagatg-- 302
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctgagcacgtctta-gagtccagcagcagtgctgagagctcccttaatgaccagatgct 503
Query: 303 -tgcatttagcagctcc 318
||||||||||||||||
Sbjct: 504 gtgcatttagcagctcc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 720
Length adjustment: 9
Effective length of query: 309
Effective length of database: 711
Effective search space: 219699
Effective search space used: 219699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_l20.g1 MSMg01no159_l20.g1 CHROMAT_FILE:
MSMg01no159_l20.g1 PHD_FILE: MSMg01no159_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:31 2005
(141 letters)
>mm_chr7_86589650_86590190
Length = 541
Score = 257 bits (133), Expect = 2e-73
Identities = 139/141 (98%)
Strand = Plus / Minus
Query: 1 actgaggacctgaaatgtgtatgtgcaaccagtgctccattctccgtcaaagccaagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 341 actgaggacctgaaatgtgtatgtgcaaccagtgctccattctccgtcagagccaagcaa 282
Query: 61 agagcacttaaataatgccaacaactatttccccccgcctgtggaaaacactgcaaagta 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 agagcacttagataatgccaacaactatttccccccgcctgtggaaaacactgcaaagta 222
Query: 121 ccaatcaaatgaaaacgacac 141
|||||||||||||||||||||
Sbjct: 221 ccaatcaaatgaaaacgacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space: 70889
Effective search space used: 70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
