Query= MSMg01no160_a15.b1 MSMg01no160_a15.b1 CHROMAT_FILE:
MSMg01no160_a15.b1 PHD_FILE: MSMg01no160_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:53 2005
(222 letters)
>mm_chr7_135928974_135929596
Length = 623
Score = 348 bits (180), Expect = e-100
Identities = 212/228 (92%), Gaps = 11/228 (4%)
Strand = Plus / Minus
Query: 1 gaaattcccctagtcaac-aatgtttgataaggaccttattcaatggcaagactctgagg 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaattcccctagtcaacaaatgtttgataaggaccttattcaatggcaagactctgagg 364
Query: 60 cccaatgtaaacactatgctaatgtcaagacacagaaaccatagatggggctaagatgta 119
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 363 cccattgtaaacactatgctaatgtcaagacacagaaaccataggtggggctaagatgta 304
Query: 120 cggaagctggttcagtgtttgtccagtgtcatcggccctaggtttgataactcgagacta 179
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 303 tggaagctggttcagtgtttgtccagtgtcatcgggcctaggtttgataactcgagacta 244
Query: 180 taaacc-----ttttttggagacacaaacctgaaaccccaacatttgg 222
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 243 taaaccaggca-----tggagacacaaacctgaaatcccaacatttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 623
Length adjustment: 9
Effective length of query: 213
Effective length of database: 614
Effective search space: 130782
Effective search space used: 130782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no160_a15.g1 MSMg01no160_a15.g1 CHROMAT_FILE:
MSMg01no160_a15.g1 PHD_FILE: MSMg01no160_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:53 2005
(275 letters)
>mm_chr7_135769232_135769906
Length = 675
Score = 532 bits (275), Expect = e-155
Identities = 275/275 (100%)
Strand = Plus / Plus
Query: 1 agtgtatggaccagcctggccttaattgccttaaacttcttgggatcctctgcctctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgtatggaccagcctggccttaattgccttaaacttcttgggatcctctgcctctgcc 260
Query: 61 tcccaagtgctggggttacagatgtgtgccacccttctccctactttaaaaaagcttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccaagtgctggggttacagatgtgtgccacccttctccctactttaaaaaagcttttg 320
Query: 121 taggttcttaaaataaaaatgtacaggcaaattgttgggctatgagatcctggagtctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggttcttaaaataaaaatgtacaggcaaattgttgggctatgagatcctggagtctta 380
Query: 181 aatatatacatatttccctacttgagctgaaagttactgacattattactattatcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatatatacatatttccctacttgagctgaaagttactgacattattactattatcacat 440
Query: 241 gattcatttatcctcatggaaaccttgtaagttgg 275
|||||||||||||||||||||||||||||||||||
Sbjct: 441 gattcatttatcctcatggaaaccttgtaagttgg 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
