Query= MSMg01no160_c24.b1 MSMg01no160_c24.b1 CHROMAT_FILE:
MSMg01no160_c24.b1 PHD_FILE: MSMg01no160_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:04 2005
(338 letters)
>mm_chr7_79748311_79749048
Length = 738
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Plus
Query: 1 aactgccctctcagatggtggaagaggaacagactcccaaaggactcagctaacagataa 60
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 aactgccctctcagatggtggaagaggaacagactctgaaaggactcagctaacagataa 260
Query: 61 aaactaaggtgcttagtctgtgtgctccccgggaatagaatgtgggtctctgtacatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactaaggtgcttagtctgtgtgctccccgggaatagaatgtgggtctctgtacatgct 320
Query: 121 aagcactctgtctataactgagaaacacccataggaatacctttgatttttaacttttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcactctgtctataactgagaaacacccataggaatacctttgatttttaacttttat 380
Query: 181 cactaatcaaaactggaaagtataatcacccttcattcatacttgggtatctggcataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactaatcaaaactggaaagtataatcacccttcattcatacttgggtatctggcataaa 440
Query: 241 catttggaaagttgctcttcgcgtccctccaggattatgggtttgaatcctgtgtcttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttggaaagttgctcttcgcgtccctccaggattatgggtttgaatcctgtgtcttta 500
Query: 301 tgggggctgatgattataaagagtgagtttccatcc 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggggctgatgattataaagagtgagtttccatcc 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_c24.g1 MSMg01no160_c24.g1 CHROMAT_FILE:
MSMg01no160_c24.g1 PHD_FILE: MSMg01no160_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:04 2005
(288 letters)
>mm_chr7_79905686_79906372
Length = 687
Score = 497 bits (257), Expect = e-145
Identities = 279/289 (96%), Gaps = 6/289 (2%)
Strand = Plus / Minus
Query: 1 ttttggctgtgatttctttaaatataattttcttctttgtaattccctttgcagacacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttttggctgtgatttctttaaatataattttcttctttgtaattccctttgcagacacaa 308
Query: 61 tagcatgtgtcaccttatgccacattctccttttttttttttttgtggagtctccattgt 120
||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 307 tagcacgtgtcaccttatgccacattttcc-tttttttttttttgtggagtctccattgt 249
Query: 121 gtactttttctttctatttttaacttggcataatcactgtaaatatgcattaaatatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gtactttttctttctatttttaacttggcataatcactgtaaatatgcattaaatatata 189
Query: 181 tttaaacaaatatatttttttcctaatcaactcacccaatac-----ttattctattcat 235
||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 188 tttaaacaaatgtattttttccctaatcaactcacccaatacagcacttattctattcat 129
Query: 236 ttgctaccttagggtttactgatctgacatctttggatcattttcctga 284
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttgctaccttagggtttactgatctgacatctttggatcattttcctga 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
